| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1410 |
|---|
| Symbol | |
|---|
| ID | 4205511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1586942 |
|---|
| End bp | 1587919 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642565964 |
|---|
| Product | T4 family peptidase |
|---|
| Protein accession | YP_698729 |
|---|
| Protein GI | 110802634 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.568813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA TAAAGATTAC AGATATAGAT GGTTTTAAAC TAGGCCACGC TCAAGATTTT
GAAGGTGCTA CAGGATGTAC AGTATTACTA TGTGAAGAAG GTGCTTCTGG AGGAGTTGAT
GTTCGCGGTG GTGCTCCTGG AACTAGAGAA ACTGATTTAT TAAATCCTAT GGAAATGGTT
GATAAAGTTC ATGCTGTAGT ATTATCTGGT GGATCTGCCT TTGGACTTGA TTCCTGCTCA
GGGGTCATGG AATATCTAGA AAATAAAAAT GTTGGATTTG ACGTAGGGGT AACTAAAGTT
CCTATAGTAT GTGGTGCTGT TTTATTTGAT TTAGCCTGTG GTAATCCTAA AGTAAGACCT
AATAAGGAAA TGGGCTTAGA AGCTTGTAAA AATTCTGAAA CCTACTTTGA CTCAAAAAAC
GGTAATATAG GTTGTGGAAC AGGTGCCACA GTAGGTAAAG CCTTAAATCA AAAACTTGCT
ATGAAAGGCG GTTTTGGAAG CTATGCAGTT CAAATCGGAG ATTTAAAGGT AGGAGCTATT
GTAGGAGTTA ATAGCCTAGG TGATATTGTT GACCCTAATG ATAACAATAA AATAATAGCG
GGTGGATTAA GCCAAGATAT GAATTCCTTT ATGAACATAG AGAAAAGCTT ATTAGCTAAT
TATTCTAATC CTAAAAATGT TTTTAAAGGA AATACTACTA TTGGGTGCAT AGTGACTAAT
GGTGATTTTA ATAAAGCTGA GGCTAATAAA ATTGCATCTA TGGCTCAAAA TGGTTTTGGA
AGAACCATTC GCCCTGCTCA CACTATGTTT GATGGTGATA CAATATTTAC TTTATCTTCA
AATAAAGTTA AGGCAGATAT AAATGTAGTT GGTCTTTTAG CTGCTCAAGT TATGGAAAAA
GCTATTATAA AAGCTGTTAA AGAAGCTGAT TCTTCATATG GATTCTTATC ACATAAAGAT
TTAAAATTTA ATGTATAA
|
|---|
| Protein sequence | MFEIKITDID GFKLGHAQDF EGATGCTVLL CEEGASGGVD VRGGAPGTRE TDLLNPMEMV
DKVHAVVLSG GSAFGLDSCS GVMEYLENKN VGFDVGVTKV PIVCGAVLFD LACGNPKVRP
NKEMGLEACK NSETYFDSKN GNIGCGTGAT VGKALNQKLA MKGGFGSYAV QIGDLKVGAI
VGVNSLGDIV DPNDNNKIIA GGLSQDMNSF MNIEKSLLAN YSNPKNVFKG NTTIGCIVTN
GDFNKAEANK IASMAQNGFG RTIRPAHTMF DGDTIFTLSS NKVKADINVV GLLAAQVMEK
AIIKAVKEAD SSYGFLSHKD LKFNV
|
|---|
| |