| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1405 |
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| Symbol | |
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| ID | 4206412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1579277 |
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| End bp | 1581856 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565959 |
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| Product | sugar hydrolase |
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| Protein accession | YP_698724 |
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| Protein GI | 110803538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.893687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TACATGTAGT TTCACATAGT CACTGGGATA GAGAATGGTA TATACCATTT
CAAAAACATA GAGTTAAATT AGTAGATTTT ATGGATTCAT TAATAAATAC CTTAGAAAAT
AATGAGCATT TTAAATATTT TCACTTAGAT GGACAAACTA TAGCTTTAGA TGATTATTTA
GAAATAAAGC CATATATGTT TCATAGATTA AAGAAACTTA TAGAAGAGGG AAGACTTCAT
GTAGGACCAT GGTATGTTCT TCAAGATGAA TATTTAATAA GTGCAGAAGC AAATGTAAGA
AATATGCTTT TAGGAATGAG ATTTGCAAAA AGATTTGGAA ATCCAGTAAA AATAGGTTAT
TTCCCAGATT CCTTTGGTAA CATATCTCAA GCGCCTCAAA TACTAAGAGG ATTTGGAATA
GATAATGCAG TATTCGGTAG AGGAATAACT CCAATAGCTT TTGATAATCA AAAGGTTGAA
GAAGCAGGAG AAAATGAATA TCACTCAGAG GTATTATGGA AATCACCAGA TGGATCAGAA
GTTTTAGGAA TACTTATGGC TAACTGGTAT AGTAATGGTA ATGAAATTCC AGCAGGTAAA
AAAGAAGCCA TTGAATTTTT AAATGATAGA GTTAATAAAG CAGATATGTA TGCTACAACA
AATCAGATAT TATTAATGAA TGGATGTGAT CATCAGCCAG TTCAAACAAA TGTTGGTGAC
ATAATAGATA ATGTAAAAGA AGATGTTGAT TTTGAATTAG TTCATAGTAA TTTAGTTCAA
TATATAGAAG ATGTTAAGAA AGAAGTTAAA GACTTAAAAG AAGTTACAGG AGAGTTAAAT
GGTCAATATA CAGATGGCTG GTGGACTCTA TGTAACACAG CTTCATCAAG ACTTTACTTA
AAGCAAATGA ATAATAAGTC TCAAGTTCTT TTAGAAAGAT ATGTTGAGCC TTTAGGAGTT
ATGGCTTCAT TAGAAGGAAA GAAATACGAA AGTGATTTCA TACTTCAAGC ATGGAAATAC
TTAATTCAAA ACCATCCTCA TGATTCAATC TGTGGATGTA GTATTGATGA AGTTCATCAA
GATATGGTAA CAAGATTTAA ATCTAGTATG CAAATATCAG AGGAAATGAT AGCTAGAAGT
ACTGAGCATA TGTTAAATCT AGTAAATGGA ACTACTACTG ATAGAGAAAG CATTGTTGTA
TTTAATACCT TAGGATGGGA TAGAAGCGAG GTAGTAGAGG CTACAGTTGA TGTAAATAAA
GAATCAGGTA TAGAAAACTT CAAGGTTGTT ACAGAAAATG GAGAGGAAGT TCCATCAGTG
GTTGAAGACT TAGGAGAAAC ATTTAAATAT ACTCTTCCAA ATAATAGATT TAGACAACCT
GAGTATGTAA ATAGATTTAA GGTTAAATTC TTAGCTAATA ATATAAAAGC TTTAGGATTA
AAATCATTTA AAATAGTTTC ATGTGAAAAG AGAGAAGAAA AAGAAGTTTC CAAAGATTTG
ACTTTTGAAA ATAAATTCTT CTCATTAAAG TTCAATGAAA ATGGTACATT TGATTTAATT
CATAAAGGAA CAAATAAAGA GTATAAGAAT TTAAATGCCT TTGAAGATTG TGGAGATATA
GGAGATGAAT ACATCTTTAG AGCTCCAAAG AAAGATTTAG TAGTAAATAC TTTAGGAAAT
AAAGCTTCTA TTAATATATT AAAAGATAAT GAAGTAGAAA AAGTAATAGA GGTTAAAAAT
ACTTTAGAAG TACCAGTAAA AGCTATTAAG AAAGAAAGTA GAAGAGTAGA AGAAATGACT
GAAATTAAGT TAGTTTCTAC TATAATCTTA AGTGAAATTT CTAAGAGAGT TGATGTTAAA
GTTGAAATAG AAAATACTGC AAAGGATCAT AGATTAAGAG CCTTATTCCC AACTGGAATA
GAAGCAAGCA CTCATTTTAC AGAGGGACAT TTTGATGTTA TAGAAAGAGA AACAACTCCA
TGGGAAGGAT GGCAAAATCC ATCTAATTGT CAAAAACAAA CAAACTTTGT TGATGTAAAT
GACGGAAAAG TTGGACTTAT GATTGCTAAC ATGGGATTAC CTGAATATGA GGTATTAAGA
GATGGTAAAA ATACTATAGC TTTAACAATA TTAAGATCTG TTGGAGAGTT AGGAGATTGG
GGAGTATTTA AAACGCCAGA GGCTCAATGT TTAGGAAATA ATGTTGCTGA ATATTCAATA
ATAGCTCATG AAGGAGATTA TGCTGGAGAA AGAGCTTACG AAGAAGCATA TAACTTAAAT
ACTCCAATGT TAGCTCTTCA AGGAGATTTT AAAAAAGAGG ATTCTTTAGT TTCAATTAAG
GGAGAAAATG TAGTTTTATC AGCCTTTAAG AAAGCTGAAG AGGGTGATTC TATAATAATA
AGAATATTTA ACATTTCTCA TAAGGAAGAA AATTTCCAAA TAAAAGTTAA TAGAGATGTT
AAAGAAATAA ATGAAGTTAA CTTAAATGAA GAACTTATAG AAAAACTAGA AGTAAAAGAA
AATGCTATTA ATGGAATTAT TTCAAAGAAA CAAATAAAAA CTTTTGAAAT AGTAATTTAG
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| Protein sequence | MKKVHVVSHS HWDREWYIPF QKHRVKLVDF MDSLINTLEN NEHFKYFHLD GQTIALDDYL
EIKPYMFHRL KKLIEEGRLH VGPWYVLQDE YLISAEANVR NMLLGMRFAK RFGNPVKIGY
FPDSFGNISQ APQILRGFGI DNAVFGRGIT PIAFDNQKVE EAGENEYHSE VLWKSPDGSE
VLGILMANWY SNGNEIPAGK KEAIEFLNDR VNKADMYATT NQILLMNGCD HQPVQTNVGD
IIDNVKEDVD FELVHSNLVQ YIEDVKKEVK DLKEVTGELN GQYTDGWWTL CNTASSRLYL
KQMNNKSQVL LERYVEPLGV MASLEGKKYE SDFILQAWKY LIQNHPHDSI CGCSIDEVHQ
DMVTRFKSSM QISEEMIARS TEHMLNLVNG TTTDRESIVV FNTLGWDRSE VVEATVDVNK
ESGIENFKVV TENGEEVPSV VEDLGETFKY TLPNNRFRQP EYVNRFKVKF LANNIKALGL
KSFKIVSCEK REEKEVSKDL TFENKFFSLK FNENGTFDLI HKGTNKEYKN LNAFEDCGDI
GDEYIFRAPK KDLVVNTLGN KASINILKDN EVEKVIEVKN TLEVPVKAIK KESRRVEEMT
EIKLVSTIIL SEISKRVDVK VEIENTAKDH RLRALFPTGI EASTHFTEGH FDVIERETTP
WEGWQNPSNC QKQTNFVDVN DGKVGLMIAN MGLPEYEVLR DGKNTIALTI LRSVGELGDW
GVFKTPEAQC LGNNVAEYSI IAHEGDYAGE RAYEEAYNLN TPMLALQGDF KKEDSLVSIK
GENVVLSAFK KAEEGDSIII RIFNISHKEE NFQIKVNRDV KEINEVNLNE ELIEKLEVKE
NAINGIISKK QIKTFEIVI
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