| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1400 |
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| Symbol | |
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| ID | 4205998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1573328 |
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| End bp | 1574899 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565954 |
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| Product | chloride channel protein |
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| Protein accession | YP_698719 |
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| Protein GI | 110803903 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.340394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAATG AGAGTACGAA AAAAGTACTG TCACATAGAA AGGATTTAAG ATTTAAATTA
GTTCTAGAAG GTGCTGCCAT AGGACTTTTA TGTTCTTTAG TTTTAGTACT AAATAGAATT
ATTGTTAATT ACTTATTTCC ACTTTTTAAA AAGCTTTATG CATGGGCAGC ATTAAGTATA
ACTAATATGA TTATAGTTTT AGTTATATTA GCTATTTTAG GAGCACTTAT TGGATTTATG
GTTAGAAGAG AGCCTATGAT TTCAGGAAGT GGTATTCCTC AAGTTGAAGG GGAATTAATT
GGTAAACTTA AAATGAATTG GCTAAAGATT TTAATTTATA AGTTCTTAGG AGGAGTAATT
TCCTTAGGAG CTGGATTGTC TTTAGGTAGA GAAGGTCCAT CAGTACAAAT GGGAGCTGCT
GTAGGAGAAG GATTTAGTAA TGGTTTAAAA AGAATAAATA TAGAGAAAAA ATATTTAATA
ACCTCAGGTG CTTCAGCTGG TTTAGCAGCA GCATTTAATG CACCTTTATC AGGGGTAATA
TTTGCCCTAG AAGAGGTACA CAAGAGTTTC TCACCTTTAG TTTTAGTTTC TGCAATGGCA
GCATCCTTAG TATCTGATTT TGTTTCAAAA CAATTTTTAG GAATGAATCC TAGTTTAGGA
ATGGAAAATG TTCCTGTATT ACCTTTAAAG TATTACTGGG TATTAATAAT ATTAGGAGTA
ATTTTAGGTA TAGGTGGTGC AATATTCTCA AAGGGAATTT TAAAAGTACA AAGTTTATAT
GGAAAGTTTA AAAATGTTCC TGTAGAAGTT AAGGTAATGA TTCCTTTCTT ACTAACAGGT
ATATTAGGTA TTTTCGCACC AATAATACTA GGTGGTGGAC ATGAACTTAT AATGGATTTA
GCAACTAAGA GTTTTCCGAT AAAGCTTCTT TTAGCTGTGC TTTTAGTTAA ATTTTTATTA
ACTATTATAA GTTTTGGTGC AGGTACACCA GGTGGTATAT TCTTCCCACT ATTACTTTTA
GGGGCAGTAG TAGGAAATAT AGTTGGCATA GTAAGTTGTA ATGCATTTGG AGTTCCAAAT
CAATATATAA TAGATTTTAT AATATTAGCT ATGGCAGGTA ACTTTGCTTC AATAGTAAAG
GCACCTATTA CAGGTATAAT ACTTATTACA GAGATGACTG GTTCTTTTGA ACATATGCTA
GCTTTATCTG TAGTTGTAAT AATTTCCTAT ATAACATCTG ACTTACTAAA AAGTGAACCA
ATATATGAAT CTTTATTAGA AAGATGGATA GAAAAGGTTG GTTCAGAAGT AGAAGAACCT
TCTAATAATA AAACTCTACT AGAGGTTGGA GTAGAACTTG GTAGTGAAGC AGAAGGAAAA
GAAATAAAGG ATGTTAATTG GCCAGAGACA GCACTTTTAG TTGCAATAAA AAGAGGAAAT
AATGAAATAA TCCCTAAGGG ATCTATTGAG ATACAAAGTG GAGATTATTT AGTGGTTATG
GTGGATGAGA GCAGAGCAAG CTCTGTTTTA GAAGAAATTC AATTCTTAAC CTCTGCTAAA
GAAGAATTTT AA
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| Protein sequence | MSNESTKKVL SHRKDLRFKL VLEGAAIGLL CSLVLVLNRI IVNYLFPLFK KLYAWAALSI
TNMIIVLVIL AILGALIGFM VRREPMISGS GIPQVEGELI GKLKMNWLKI LIYKFLGGVI
SLGAGLSLGR EGPSVQMGAA VGEGFSNGLK RINIEKKYLI TSGASAGLAA AFNAPLSGVI
FALEEVHKSF SPLVLVSAMA ASLVSDFVSK QFLGMNPSLG MENVPVLPLK YYWVLIILGV
ILGIGGAIFS KGILKVQSLY GKFKNVPVEV KVMIPFLLTG ILGIFAPIIL GGGHELIMDL
ATKSFPIKLL LAVLLVKFLL TIISFGAGTP GGIFFPLLLL GAVVGNIVGI VSCNAFGVPN
QYIIDFIILA MAGNFASIVK APITGIILIT EMTGSFEHML ALSVVVIISY ITSDLLKSEP
IYESLLERWI EKVGSEVEEP SNNKTLLEVG VELGSEAEGK EIKDVNWPET ALLVAIKRGN
NEIIPKGSIE IQSGDYLVVM VDESRASSVL EEIQFLTSAK EEF
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