| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1398 |
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| Symbol | |
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| ID | 4204192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1571733 |
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| End bp | 1572458 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565952 |
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| Product | N-acetylmuramoyl-L-alanine amidase domain-containing protein |
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| Protein accession | YP_698717 |
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| Protein GI | 110802448 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.373553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA GATTTATATT TTTATTAGGA ATTTTTCTTT TAGTAAATTC ACTTAGCATT
ACTTTACTTG AAGAGAAAGT TTTAGGAAAA GAAAAAGAAG AGGTTACTAT ATGTATTGAT
GCAGGGCATC AAGAAAAAGG AGATAGGAAG CTTGAACCTA TAGCACCCTG GTCTAATGAA
AAAAAGCCTA GAGTATCTTC AGGGACAGCG GGAGTTGGTA CAAAAAATAA GGAATATGAA
ATAAACTTAG AAGTAGCTAT GATCTTAAAA GAGCTTTTAA ATAGAGAAGG CTATAAAGTA
GTTATGACAA GGGAGAAAAA CCAGGTTACC TTAAGCAATA GAGAAAGGGC AGAAATAGGA
AATGCATCAA AGGCAGATAT TTCAATAAAA CTTCACTGTG ATGGATCAAA TAATTCAGGG
AAAAGAGGAG CCTCAATTTT AATTCCTTCT TCTGAAACAA AGGAGTTAAA AGGTATATAT
GAAGAAAGTA AGAAATATGG AGAAATTTTA AGTGAAACTT TAAAAGATGG TGGAGTAAAA
GTTAACGGAG TTTTTGAAAG AAAAGATATG ACAGGATTTA ATTGGTCACA AAGACCTGTA
ATAATTTTAG AAATGGGATT TATGAGCAAT TGGGAAGATG ACGCTTTATT AGGAGATAAG
TTATATCAAC AGAAAATAGC TGATTTAATA GTTAAGTCCT TAGAAAAATA TAGAGTAGAA
CTATAG
|
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| Protein sequence | MKKRFIFLLG IFLLVNSLSI TLLEEKVLGK EKEEVTICID AGHQEKGDRK LEPIAPWSNE
KKPRVSSGTA GVGTKNKEYE INLEVAMILK ELLNREGYKV VMTREKNQVT LSNRERAEIG
NASKADISIK LHCDGSNNSG KRGASILIPS SETKELKGIY EESKKYGEIL SETLKDGGVK
VNGVFERKDM TGFNWSQRPV IILEMGFMSN WEDDALLGDK LYQQKIADLI VKSLEKYRVE
L
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