| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1397 |
|---|
| Symbol | |
|---|
| ID | 4205593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1570345 |
|---|
| End bp | 1571496 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565951 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698716 |
|---|
| Protein GI | 110803353 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.240429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AACCCAAAAT ATTATTAGTG ACTTCTTTAT CCCTAATAGT ATTATTAACC
TTATCCATAT ATGTATCCTT AAACAAAAAG AAAACTTCAG CATTTTCAGA AGTCATAAAT
TTATTAAATG AACCTCATCA AAAAGAATAT GATGAATTAA AAGGAAAATT TGAAAAAGTA
CTTCAAGACT TATTTAAAAA TAGAAATATA GCCATATTGA ACAATGATTT AGAGGAATTA
AAGAAATTTT ATGATTTACA AAAAAAGCCT AGTCTTTGGG CCTATGAAAG TGAAAGTAAA
AAAGTTAAGT ATTTAAACAA CTGGTCTCAA AAACAAGGAG TTGTATTTAA TGAAATAAAA
TCAAAAATTG AAATAAGAAA GGCTAGAGAA AGAGAAAAGG ACTTATACGG AATAATATGT
GTTGTTTCAA GTGAATTTAC ATATTATTAT CTTAATGAAC CACTTAAAAC TAATACCTTT
AGATTAGGTA CTTATCACTA TTTAAATTTA AAAGATGAGG GAGATAGGTG TATTATCACT
AAAGAATGGT ACACCGATCC TTTTGCTGAT TCTCTAGATT TAAATAATAT AAAATCTGAT
GAAATTAAAT CATATATTTT AAATAGTTCT AGTCCAGATT ATTCACCTGA TGAAAGAACA
CAAAAAGCTA TAGATTATGC ACACACCTAT TGTGGAGCAG CTGCAGATAA TGAACTTGGT
TTTAACTATA ATAAAAAATA CACAGACTTT AACCCTCAAG GAGGAGACTG TGCAAACTTC
GCCTCTCAAA TTCTTTTTGA AGGTGGTGGC TTTAAGAAAA ATTCAACATG GAACTATTCT
GATGGTGAAG GTTCTAAGGC TTGGGTAAAT GCTCAAGCAT TTAAAAATTA CATGGTTAAT
AGTGGGCGTA CTTCCTATAT TGCTAAGGGT AAATATTCTG AAATATATAA AGCTGCCTAT
AACTTAAGAC CTGGTGATTT TGTTGCTTAT GAAAAAAATG GACGAATAAC TCACATTTCA
ACAGTTACAG GATTAGATAG TAAAGGTTAT CCCCTAGTAA CTTGCCATAA CACAGATAGA
CTTCTTGTTC CTTTTGATTT AGGTTGGAGC AATGATAATA TACGCTTTCA TCTAGTAGAT
GTTTATTATT GA
|
|---|
| Protein sequence | MKRKPKILLV TSLSLIVLLT LSIYVSLNKK KTSAFSEVIN LLNEPHQKEY DELKGKFEKV
LQDLFKNRNI AILNNDLEEL KKFYDLQKKP SLWAYESESK KVKYLNNWSQ KQGVVFNEIK
SKIEIRKARE REKDLYGIIC VVSSEFTYYY LNEPLKTNTF RLGTYHYLNL KDEGDRCIIT
KEWYTDPFAD SLDLNNIKSD EIKSYILNSS SPDYSPDERT QKAIDYAHTY CGAAADNELG
FNYNKKYTDF NPQGGDCANF ASQILFEGGG FKKNSTWNYS DGEGSKAWVN AQAFKNYMVN
SGRTSYIAKG KYSEIYKAAY NLRPGDFVAY EKNGRITHIS TVTGLDSKGY PLVTCHNTDR
LLVPFDLGWS NDNIRFHLVD VYY
|
|---|
| |