Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1389 |
Symbol | |
ID | 4206306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1560826 |
End bp | 1562412 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565943 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | YP_698708 |
Protein GI | 110803627 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000667125 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATA TAAAATTTGA TGACTTAGGT CTTAAGGAAA GCTTACTTAA AGCTATAAAA GATATGGGAT TTGAAGAGCC ATCTCAAATA CAAGCTGAAA GTATTCCTGT AGCCCTAGAA GGACACGATA TAATCGGTCA AGCTCAAACT GGTACTGGTA AAACAGCTGC TTTTGGATGC GCTATAATAA ATAATGCTGA TTTTTCAGGA AAGAAGAAAT CACCAAAAGC ACTTATTTTA GCACCAACTA GAGAGCTTGC TATACAAGTT AATGAAGAAC TTGTAAGACT TGGAAAACAT GAAAAACTTT CTGTTTTACC AATATATGGT GGTCAGCCAA TAGATAGACA AATTAGAGCT TTAAAAAATG GTGTTGATAT AGTTGTTGGA ACACCTGGTA GAGTGTTAGA TTTAATAAGA AGAAAGAGTT TACCTCTTAA CGATATAGGA TTCCTAGTGT TAGATGAAGC TGACGAAATG TTAAACATGG GATTCATCGA TGATTTAGAA GAAATTGTTA AATCATTAAA AACTGATAGA CAAACACTTT TATTCTCTGC TACTATGCCT CCACAAATAA AGAAATTAGC TAGAAATTAC ATGAAAGAAG ATACTAAGCA TATCGCAATA AAGAAAAGTT CTTTAACAGT TTCAAAAATA GAACAATTTT ATTTTGAAAT AAAACATAGA GATAGATTTG AAACACTTTG TAGAGTTTTA GATTTTGATG AACCAAATGC TGCAATAATT TTCTGCAAAA CAAAAAAAGG TGTTGACGAA GTTGTAGAAA AAATGCAAGC TAGAGGATAT ATGGTTGAAG GTATGCACGG AGATATGAGC CAAAACCATA GACTTCAAAC TTTAAGAAAA TTCAAAGAAG GAAGCTTAGA TTTCTTAGTT GCTACTGATG TTGCAGCTAG AGGAATAGAT GTTGAAAGCG TAACTCACGT TATAAACTAC GATCTACCAC AAGACAATGA AAGTTATGTA CATAGAATCG GAAGAACAGG TAGAGCTAAT AGAGAAGGAG TTGCCTATTC TTTAGTTACT CCAAAAGAAT ATATGATGCT TAAGCAAATA CAAAAGCATA CTAAGAGTAA AATAATAAGA AAAGCTGTAC CTACAGTTGA TGAAATATTC CAAAATAAAC ATAATAACAT AATAAATAAT GTAAAATCTA CTATAGAAGA AGCTTCAGAA GATTTCCAAA AGTTTATTCC AATAGCTACT CAACTAGATG AGGATTATAG CTTAGTAGAT GTTGCAGCTG CTCTTTTAAA AATAGTATTT GATAAAGAAT CTTCTTTTGA TTACACTTCA AATTCTATAG AAGCTCCTGT AATGGACGAA ACTAGATTAT TTATGTCTGT TGGAAGAAGA GATGGTATAA CTCCTAAATC TCTTGTTAAC TTCTTAAAAG AGACTGCTAG AATAAGCCCT AAGCAAGTTG GAGATATAGA CATAAAAGAA AACTTCTGCT TTGCTAATGT TGATGCTGAT GCAGTAAATA ATATAATGAA AAAATCAATG GGTAAAAAAC TTAACAAAAG AACTGTTAAT ATAGAAGTTG CTAAAAAAAG AAAATAA
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Protein sequence | MNNIKFDDLG LKESLLKAIK DMGFEEPSQI QAESIPVALE GHDIIGQAQT GTGKTAAFGC AIINNADFSG KKKSPKALIL APTRELAIQV NEELVRLGKH EKLSVLPIYG GQPIDRQIRA LKNGVDIVVG TPGRVLDLIR RKSLPLNDIG FLVLDEADEM LNMGFIDDLE EIVKSLKTDR QTLLFSATMP PQIKKLARNY MKEDTKHIAI KKSSLTVSKI EQFYFEIKHR DRFETLCRVL DFDEPNAAII FCKTKKGVDE VVEKMQARGY MVEGMHGDMS QNHRLQTLRK FKEGSLDFLV ATDVAARGID VESVTHVINY DLPQDNESYV HRIGRTGRAN REGVAYSLVT PKEYMMLKQI QKHTKSKIIR KAVPTVDEIF QNKHNNIINN VKSTIEEASE DFQKFIPIAT QLDEDYSLVD VAAALLKIVF DKESSFDYTS NSIEAPVMDE TRLFMSVGRR DGITPKSLVN FLKETARISP KQVGDIDIKE NFCFANVDAD AVNNIMKKSM GKKLNKRTVN IEVAKKRK
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