| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1386 |
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| Symbol | tig |
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| ID | 4204363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1558421 |
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| End bp | 1559707 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565940 |
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| Product | trigger factor |
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| Protein accession | YP_698705 |
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| Protein GI | 110801611 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00824823 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCTA AAATGAACAA AATAGACACA AATGTTGTAG AATTAGAAAT TAAAGTTGAT
GCTAAGGACT TTAACGAGGC GTTAAAAAAG TCTTATAATA AAAACTCAAA GAAGTTTAAC
ATACCAGGAT TCAGAAAAGG AAAAGTCCCA ATGAACATGG TTAAAAAATT CTACGGAGTT
GAAGTTTTAT TTGACGATGC AATAAACGCT TGTATAGATA AAACTTACGG AGTTGCTTTA
GAAGAAAACA ACGTAAGACC AGTTGATTAT CCACAAATCG AAGTAGTAGA AGTTGGAGAA
GGAAAAGACT TAGTTTACAA AGCTAAAGTT ACTACTTACC CAGAAGTTAC TTTAGGAGAT
TACAAAGGAT TAGAAGTTGA AGAAGTATCT TACGAAGTAA AAGATGAAGA CATAGAAAAA
CAATTAGCTG ATATGCAAGC AAGAAATGCT AGAGTTGAAA CTAAAGAAGA AGGAACAGTT
GAAAATGGAA ATATAGCTGT TATAGACTTC AAAGGATTCA TAGATGACGT AGCATTCGAA
GGTGGAGAAG GAAAAGATTA TCCATTAGAA ATAGGTTCAG GAAGCTTCAT AGATAACTTT
GAAGAGCAAT TAATTGGATT AAAAGTTGGA GAAAGCAAAG ATGTTAACGT AACATTCCCA
GAAGCTTATG GAAAAGAAGA CTTAAACGGA AAACCAGCTA AATTCGAAGT AACTGTAAAA
GAAATAAAAG TTAAAGAATT ACCAGCTTTA GATGATGAGT TTGCTAAAGA AGTTTCAGAA
TTTGATACTT TAGAAGAATT AAAAGCTGAC TTAAAAGAAA AAGCTGTAAA AGCTAACGAA
TTAAGAGCTA AAAGAGAAAT GGAAGAAAAA GTTATAAACG CTGTAGTTGA TAACGCAAAA
GTAGAAATTC CAGAAGCTAT GATAAACAGA GAAGTTGAAA ACATGGTAAG AGACTTAGAA
ATGAGATTAG GACAACAAGG ACTAAGCTTA GAGCAATACT ATGAGTTCAC TGGAAGTACT
GAAGATAAGA TGAAATCTTA CATGAAAGAA AATGCTGAAA GAAAAGTAAA AACTGATTTA
GTTATGAGTG CTGTAACTGA AGCAGAAGCT ATAGAAGCTA CTGAAGAAGA ATTAAAAGCA
AAAGCAGAAG AAGTTGCTAA AATGTACTCA AACGGAGCAG AAACTGAGAA AATGGTTGAT
CTATTATTAA ATGCTCAAAG AGCTGCTTTA GAGTTAGATG TTAAGAGAGA AAAAACTTTA
AAAATGTTAT TTGAATCTTT AAAATAA
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| Protein sequence | MEAKMNKIDT NVVELEIKVD AKDFNEALKK SYNKNSKKFN IPGFRKGKVP MNMVKKFYGV
EVLFDDAINA CIDKTYGVAL EENNVRPVDY PQIEVVEVGE GKDLVYKAKV TTYPEVTLGD
YKGLEVEEVS YEVKDEDIEK QLADMQARNA RVETKEEGTV ENGNIAVIDF KGFIDDVAFE
GGEGKDYPLE IGSGSFIDNF EEQLIGLKVG ESKDVNVTFP EAYGKEDLNG KPAKFEVTVK
EIKVKELPAL DDEFAKEVSE FDTLEELKAD LKEKAVKANE LRAKREMEEK VINAVVDNAK
VEIPEAMINR EVENMVRDLE MRLGQQGLSL EQYYEFTGST EDKMKSYMKE NAERKVKTDL
VMSAVTEAEA IEATEEELKA KAEEVAKMYS NGAETEKMVD LLLNAQRAAL ELDVKREKTL
KMLFESLK
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