| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1384 |
|---|
| Symbol | clpX |
|---|
| ID | 4206202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1556295 |
|---|
| End bp | 1557602 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642565938 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_698703 |
|---|
| Protein GI | 110803718 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.126151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAT TTGAAGACAA AAAGCAATTA AGATGTTCTT TTTGTGGTAA AAATCAGGAA
CAGGTTAAAA GATTAATCGC AGGTCCTGGT GTATATATAT GTGATGAATG TATAGAGCTT
TGTTCAGAAA TAATAGAAGA TGAATTTGAA GGAAATACAG AATCATCACC ATTAGAAACT
AGCAATCTTC CAAAGCCACA AGAAATCAAA GACTATTTAG ATCAATATGT TGTTGGTCAA
GATAGAGCTA AGAAATCTTT AGCAGTAGCT GTTTATAATC ATTACAAGAG AATAAATGCT
AATAAGGCAG AGGATGATGT TGAACTACAA AAAAGTAACA TACTTTTATT AGGACCTACA
GGTTCAGGTA AGACATTACT TGCACAAACT CTTGCCAAAA TGTTAAATGT TCCATTTGCT
ATAGCAGATG CTACAACATT AACGGAGGCA GGATATGTTG GTGAAGATGT TGAAAATATA
CTTTTAAAGC TAATTCAAAA TGCAGATTAT GATGTTGAAA GAGCTGAAAA AGGTATAATA
TATATAGATG AGATAGATAA GATTGCTAGA AAATCAGAAA ATCCATCTAT TACAAGAGAT
GTTTCTGGAG AGGGTGTTCA ACAAGCCTTA TTAAAAATAT TAGAGGGAAC AACAGCTTCA
GTACCACCAC AAGGTGGAAG AAAGCATCCA CATCAAGAGT TTATACAAAT TAACACTTCA
AATATTTTAT TTATTTGTGG TGGAGCTTTT GATGGAATAG ATAAAATAAT AGAAAAAAGA
GGAACTAAGA GTTCTATAGG TTTTGGCGCT GAGGTTAAAG GAAAAAGTGA AAAGAACGTT
GGAGAACTTT TAAAGGATAT AATGCCTGGG GATTTATTAA AATTTGGTTT AATACCAGAA
TTTGTTGGTA GATTACCAGT ATTAGTAACT TTAGAAGCTT TAGATAACGA AGCTTTAGTA
AGTATTTTAA CTAAGCCAAA GAATGCTCTA GTAAAACAAT ACAAAAAGTT ATTTGAGCTT
GATAATGTAA AACTAGATTT TACAGAGGAA GCTTTAAAAG CTATTGCAGA TGAAGCTATA
AATAGAAAAA CCGGTGCTAG AGGATTAAGA GCTATAGTAG AAGAAACTAT GATGGATATA
ATGTTTGATA TACCATCAGA AGAGAATATT GTAAAAGCTA CTATAACTGA AGAGACAATC
AAAGATAGAA AAGATCCAGA GCTTGAAAAG CTTCCAGAAG GAGAAGTTAG ACCAACTTTA
AAAACTGAGA AGAAAAATAA AGCTAGAAAA GATATAGAAA CTGCTTAA
|
|---|
| Protein sequence | MGKFEDKKQL RCSFCGKNQE QVKRLIAGPG VYICDECIEL CSEIIEDEFE GNTESSPLET
SNLPKPQEIK DYLDQYVVGQ DRAKKSLAVA VYNHYKRINA NKAEDDVELQ KSNILLLGPT
GSGKTLLAQT LAKMLNVPFA IADATTLTEA GYVGEDVENI LLKLIQNADY DVERAEKGII
YIDEIDKIAR KSENPSITRD VSGEGVQQAL LKILEGTTAS VPPQGGRKHP HQEFIQINTS
NILFICGGAF DGIDKIIEKR GTKSSIGFGA EVKGKSEKNV GELLKDIMPG DLLKFGLIPE
FVGRLPVLVT LEALDNEALV SILTKPKNAL VKQYKKLFEL DNVKLDFTEE ALKAIADEAI
NRKTGARGLR AIVEETMMDI MFDIPSEENI VKATITEETI KDRKDPELEK LPEGEVRPTL
KTEKKNKARK DIETA
|
|---|
| |