Gene CPR_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1371 
Symbol 
ID4206404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1542934 
End bp1543725 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content29% 
IMG OID642565925 
Productcarboxypeptidase-like protein 
Protein accessionYP_698691 
Protein GI110803569 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.919342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTTA AAAGTTACAT ATTAACAGGA GTTATTATTA CATTAACAAT AACTAGTTTT 
TTTATAGGAA GAAGCTATGA GTCTTACAAA TTTAAAGCTT TAGAGGTGAG TAATGTAAGT
TCTAATGAAG AGATAGATAA TGAGAATAAA GAATCAAATA AAGAAGAGCT TAGTGAAGAG
CAGCTTCGTA TTAAAAAAAT AATTTTAAAT GATAAGGATG GATTGTTTAA GGTTGTAAAT
AAGGAAAACT CAATAGATAA AAGTTATAAG CCAGAAGAAT TAATTATTCC AAAGGTTAAT
TTTGTAGGTT TAGAAAATGA ACCTAGAAAC AGAATTAGCA ATGTATTAAA GAAAGATTTA
GAAAATCTTT TTAGTGATGC AAAAAAAGCT GGCTTAGACT TATACCTTTC TTGTGCTTAT
AGGTCTTATG AAGAGCAGGA ATATTTATAT GGCAGAGCTT TAGAAAAAGA GAAGAGTGAT
TCAAGCAATC TTGTGGCTTT ACCAGGAACA AGTGAGCATC AATTAGGATT AGCTGTAGAC
CTTACTACTA GATCTATAGG GTTTCAATTA GAAGAGTCTT TTGAGGATAC AAAAGAAGGA
CAGTGGCTTT TAGAAAACTC TCATAAATAT GGTTTCATTC TAAGATATTT AAAAGGAAAG
GAAGATATAA CTGGGTATAG TTATGAACCT TGGCACTATA GATATGTTGG AGATTTAGAA
GTAAGCAAAT ATTGTTATGA TAATAATCTT ACATTAGAGG AATTATATGA TGAATTGGAT
ATAACAAAAT AA
 
Protein sequence
MKLKSYILTG VIITLTITSF FIGRSYESYK FKALEVSNVS SNEEIDNENK ESNKEELSEE 
QLRIKKIILN DKDGLFKVVN KENSIDKSYK PEELIIPKVN FVGLENEPRN RISNVLKKDL
ENLFSDAKKA GLDLYLSCAY RSYEEQEYLY GRALEKEKSD SSNLVALPGT SEHQLGLAVD
LTTRSIGFQL EESFEDTKEG QWLLENSHKY GFILRYLKGK EDITGYSYEP WHYRYVGDLE
VSKYCYDNNL TLEELYDELD ITK