Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1371 |
Symbol | |
ID | 4206404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1542934 |
End bp | 1543725 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565925 |
Product | carboxypeptidase-like protein |
Protein accession | YP_698691 |
Protein GI | 110803569 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.919342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACTTA AAAGTTACAT ATTAACAGGA GTTATTATTA CATTAACAAT AACTAGTTTT TTTATAGGAA GAAGCTATGA GTCTTACAAA TTTAAAGCTT TAGAGGTGAG TAATGTAAGT TCTAATGAAG AGATAGATAA TGAGAATAAA GAATCAAATA AAGAAGAGCT TAGTGAAGAG CAGCTTCGTA TTAAAAAAAT AATTTTAAAT GATAAGGATG GATTGTTTAA GGTTGTAAAT AAGGAAAACT CAATAGATAA AAGTTATAAG CCAGAAGAAT TAATTATTCC AAAGGTTAAT TTTGTAGGTT TAGAAAATGA ACCTAGAAAC AGAATTAGCA ATGTATTAAA GAAAGATTTA GAAAATCTTT TTAGTGATGC AAAAAAAGCT GGCTTAGACT TATACCTTTC TTGTGCTTAT AGGTCTTATG AAGAGCAGGA ATATTTATAT GGCAGAGCTT TAGAAAAAGA GAAGAGTGAT TCAAGCAATC TTGTGGCTTT ACCAGGAACA AGTGAGCATC AATTAGGATT AGCTGTAGAC CTTACTACTA GATCTATAGG GTTTCAATTA GAAGAGTCTT TTGAGGATAC AAAAGAAGGA CAGTGGCTTT TAGAAAACTC TCATAAATAT GGTTTCATTC TAAGATATTT AAAAGGAAAG GAAGATATAA CTGGGTATAG TTATGAACCT TGGCACTATA GATATGTTGG AGATTTAGAA GTAAGCAAAT ATTGTTATGA TAATAATCTT ACATTAGAGG AATTATATGA TGAATTGGAT ATAACAAAAT AA
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Protein sequence | MKLKSYILTG VIITLTITSF FIGRSYESYK FKALEVSNVS SNEEIDNENK ESNKEELSEE QLRIKKIILN DKDGLFKVVN KENSIDKSYK PEELIIPKVN FVGLENEPRN RISNVLKKDL ENLFSDAKKA GLDLYLSCAY RSYEEQEYLY GRALEKEKSD SSNLVALPGT SEHQLGLAVD LTTRSIGFQL EESFEDTKEG QWLLENSHKY GFILRYLKGK EDITGYSYEP WHYRYVGDLE VSKYCYDNNL TLEELYDELD ITK
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