Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1370 |
Symbol | |
ID | 4204458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1541989 |
End bp | 1542900 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565924 |
Product | hypothetical protein |
Protein accession | YP_698690 |
Protein GI | 110801532 |
COG category | [S] Function unknown |
COG ID | [COG2035] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATGTGA TTAACTTTAT AAGAGGGTTT TTAATGGCTT TAGCAGATAG TGTTCCAGGG GTTTCTGGTG GTACTATAGC ATTTATAATG GGATTTTACA ATAAGTTTAT AAGTTCATTA AATGCTTTAA CATCTACAAA AAAAACTGAT GTAAACAAAA AAGATGCTAT AATATTCTTA TTAAAATTAG GAATAGGTTG GATAACTGGT ATGGTTTTAT CAATATTATT TATAGCATCA ATATTTGATA AAGAAATATA TAAAATCAGT TCTTTATTTA CTGGATTTAT AATATTTTCT ATACCAATAA TAATTAGTGA AGACAAAGAA TCATTAAAGA AAAACTATGG ATACATAATA TATGCTATTT TAGGAATAGC TATTGTTGCT GCAATAACAT ATTTTAACCC AGCTACAGGA AGTGCAAAAG GAACAAGTTT AGTATTAAAT GAGTTTTCAT TACCACTTGC ACTATATGTT TTTTTTGCTG GAATGATTGC TATATCAGCA ATGGTTTTAC CAGGAATATC AGGATCAACA TTACTTTTAA TATTTGGTCT TTATGCACCT GTTGTAAATG GAGTGAAAGA AGTTTTAACA TTTAATTTTA GTTATTTACC TATGCTTATG GTTTTTGGAC TAGGAGTAGT TGTAGGAATA ATAACTACAA TAAGATTAAT AAAATTCTTA CTTTCAAATT ATAGGTCTCA AATGATTTAT TTTATAATAG GATTAATGAT TGGATCTATA TATGCAGTTT TTATGGGACC AACTACATTA AAAATTCCAA AGGCTGCTAT GAATTTAAGT AGCTTTAGTT TCCTATTCTT TATTATAGGA GGAGCTTTAA TTTTAGGGTT GCAACAGTTA AAAGGATACC TTGAGAAGAA AGAAAAAGTT TCTAATATAT AA
|
Protein sequence | MYVINFIRGF LMALADSVPG VSGGTIAFIM GFYNKFISSL NALTSTKKTD VNKKDAIIFL LKLGIGWITG MVLSILFIAS IFDKEIYKIS SLFTGFIIFS IPIIISEDKE SLKKNYGYII YAILGIAIVA AITYFNPATG SAKGTSLVLN EFSLPLALYV FFAGMIAISA MVLPGISGST LLLIFGLYAP VVNGVKEVLT FNFSYLPMLM VFGLGVVVGI ITTIRLIKFL LSNYRSQMIY FIIGLMIGSI YAVFMGPTTL KIPKAAMNLS SFSFLFFIIG GALILGLQQL KGYLEKKEKV SNI
|
| |