| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1366 |
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| Symbol | cax |
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| ID | 4206179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1537656 |
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| End bp | 1538702 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565920 |
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| Product | calcium/proton exchanger |
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| Protein accession | YP_698686 |
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| Protein GI | 110803734 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.609235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAC TAAAATGGCT TTTAATATTT ATTCCTATAA GTATTATAGG TGAATTTATG
CATTTTTCTC CAACTCTTAT GTTTATATTA TCTGCTTTGG CAATAGTTCC TTTAGCAGGT
CTTATGGGAG AGGCAACAGA GGAAATATCA TTTTATACTG GGCCAAAATT AGGTGGTTTT
TTAAATGCTA CTTTTGGGAA TGCTACAGAA CTTATAATTT CATTTTTTGC ATTAAAAGAT
GGTTTGTTCG ATGTGGTTAA AGCTTCTATT GCAGGTTCTG TAATAGGAAA TATACTATTA
GTTCTAGGTG CTAGCATGTT AGCAGGAGGA TTAAAATATA AAACACAAAG TTTCAATAAA
AAAGTAATGG AAACCAGTTC AAGTATGCTA TTATTTGCTG TTATTGGATT AACAATTCCT
GCTATATTTA TGCATACAAT AAAGCCAGAA TTTTTAAACA CAAAATATGA AAGTTTAAGT
GTAATAGTTG CTATAGTAAT GTTTGCTATA TACATATTAA GTTTAATATT CTCATTTTTC
ACTCATAAGG ATATATATGC AGTAGAACAA GATGAGGAAG ATGGAGAAGC TAAATGGTCA
TTAAAAAAGG CCATAACAGT GCTTATTGTA GCTACAGTAA TAATTGCTAT AGAGAGTGAA
TTTTTAGTTG GGGCAGTAGA ACCGATGACA GAAGCTCTTG GACTTAGTAA GCTTTTTGTC
GGGATAATAA TAATTCCTAT AATAGGTAAT GCTGCAGAAC ACAGCACAGC AATAATAATG
GCAATGAAGA ATAAAATGGA TGTTTCAGTA GAAATAGCTA TAGGATCAAG TCTGCAAGTT
ATTTTATTTG TGGCTCCAGT ATTAATATTT TTAAGTCTTA TATTTAAGCC TATGAGTATA
ATATTTAATG CCTTTGAATT AGTAGCTTTA ATAGTTTCAG TACTTATAGC TAATAGAATT
GTTAACGATG GAGAATCAAA TTGGCTTGAA GGAGTTCAAC TTTTAGCTGT TTACATAATA
ATAGCAGCTA TGTTTATGAT CGTTTAA
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| Protein sequence | MKILKWLLIF IPISIIGEFM HFSPTLMFIL SALAIVPLAG LMGEATEEIS FYTGPKLGGF
LNATFGNATE LIISFFALKD GLFDVVKASI AGSVIGNILL VLGASMLAGG LKYKTQSFNK
KVMETSSSML LFAVIGLTIP AIFMHTIKPE FLNTKYESLS VIVAIVMFAI YILSLIFSFF
THKDIYAVEQ DEEDGEAKWS LKKAITVLIV ATVIIAIESE FLVGAVEPMT EALGLSKLFV
GIIIIPIIGN AAEHSTAIIM AMKNKMDVSV EIAIGSSLQV ILFVAPVLIF LSLIFKPMSI
IFNAFELVAL IVSVLIANRI VNDGESNWLE GVQLLAVYII IAAMFMIV
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