Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1351 |
Symbol | |
ID | 4204736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1524494 |
End bp | 1525537 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565905 |
Product | hypothetical protein |
Protein accession | YP_698671 |
Protein GI | 110802291 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.429958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTACG TAAATGATAT AAATATAATA GAAGCTGTTA TACATATATT AGACAGTAAC AGTGATGAAC CTATATTAAA TGAGTATAAA TTAGAGTTAA CAGATGAAAT TTATAAGTTT ATATATAAAC ATGTAGAAAA GGGGTTAAAA AGTGAAGATT TAAAGTATGC TATTTTTAAT CCAGAAAGAC ATATAGTTAA GGAAGTTTCT CAAGATTTTT TAAATGGAGT TAATAATGAT ATAGTGGAAG TTTCTAAGGA ACTAGCAAGA CAGATGTTTT ATATTATGAA GGCAAATATA AATATTCCAA GTTGTGATTT GCTTACAGTA TCAATATCTA CAGATCAAGG ACCTATGCTA GGGATTTTAA AAATGGATTA TATAAAGAAC TTTACTCATA AGGTTGATTT TGTCCATGAT AAAATAGGAA TAGGAATAGT AGAACAGGCA GCAGGACTTC CAGCATCAGG GCAAAAAGTT CAAAAGTGCG CATTTATAAA ACCTATAAGA GAAGATCAAA AGGTTAATCT TATGGTAATA GATAAGAAAA AGAAATCTTC AGAAGAGGAT GAGTTATCTT TAAATTACTT TGTAGATAAC TATTTAGGAT GCACAGTTTT TCAAAATGAA AGAGATATGA CAAAAACCTT TGTAAAGGCA ACAGAAGAGT GGACTAGAAA TAATATTATT GAAGATGCAG AAAAAGCTGA AGGTATAAGA AGTAAAATAA AGAATAAGCT TAAAGAAGAG GAAATTATAA ATATAGAAGA ATTATCCCGT GAGTTATTTA ATGAAGAAGA GCCTATACTA AAGAGTGATT TTACAACCTT TGTAAGAGGC CATGGCTTAG AGAATGATGT TGAAGTAGAT AAACTTTGGA TTGAAAAAAA GATGAAAAGA ACTAGACTTA AAATAGATAA GGAAATAGAT TTATATATTG ATGATGAAGC TTATCATGAT GACTCTAAAT TTGAAATTGT GAGAAATGGT GATGGAAGCA TAAATATGGT TATAAAAAAT ATTAAGAATT ATATAGAGAA ATAA
|
Protein sequence | MEYVNDINII EAVIHILDSN SDEPILNEYK LELTDEIYKF IYKHVEKGLK SEDLKYAIFN PERHIVKEVS QDFLNGVNND IVEVSKELAR QMFYIMKANI NIPSCDLLTV SISTDQGPML GILKMDYIKN FTHKVDFVHD KIGIGIVEQA AGLPASGQKV QKCAFIKPIR EDQKVNLMVI DKKKKSSEED ELSLNYFVDN YLGCTVFQNE RDMTKTFVKA TEEWTRNNII EDAEKAEGIR SKIKNKLKEE EIINIEELSR ELFNEEEPIL KSDFTTFVRG HGLENDVEVD KLWIEKKMKR TRLKIDKEID LYIDDEAYHD DSKFEIVRNG DGSINMVIKN IKNYIEK
|
| |