Gene CPR_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1348 
Symbol 
ID4204236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1522356 
End bp1523054 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content27% 
IMG OID642565902 
Producthypothetical protein 
Protein accessionYP_698668 
Protein GI110802995 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATAA CTTTTATAAG AACAGCAATA CTTTATTTCA TTGTAATTGT AAGTATTAGA 
CTTATGGGTA AACGTCAAGT TGGAGAATTG CAACCTTACG AGCTTGTAAT AACCTTAATG
CTATCTGATT TAGCATCCTT ACCAATGCAA GATACTCGTC TTCCGCTCCT TTTAGGCATA
GTACCTATAA TTACACTTTT ATTTATAAAA ATATTAATAT CTGAAATCCA ACAACATAGC
TGTTTATTTG AAAAACTTCT AGATGGTACT CCTTCCATAA TAATAAGCAA TGGAGAAATC
AACCTAGAAA TGATGAAAAA ACAAAAACTA ACAATGAACG ATATATTAGA AGAATTAAGA
AGCGCTGGTT ATTTAGATAT AAGCGATATT CAATATGCAA TTATAGAAAC TAATGGAACC
ATATCTATTA TTCCTAAAAG CGCTTGTGAT AATGTTAAGA GAAAAGATTT GAAAATTAAA
GAAAGTGAAT CAAAAATTCC AATTGTTTTA TTAGAAAATG GTAATTTAAA TAAAAAAGTT
CTAAAACAAA TTAATAAAGA TGAAAACTGG TTAGATGAAA AATTAAAATC TCTTAATTAT
CCACCTAGAG ATAAATTATT TCTAGTTATG ATAGATTCTA ATGGTAAATT ATTTATTCAA
AGAAAAAATC AGAAAGATAA GGAGGACATA ATACTATGA
 
Protein sequence
MLITFIRTAI LYFIVIVSIR LMGKRQVGEL QPYELVITLM LSDLASLPMQ DTRLPLLLGI 
VPIITLLFIK ILISEIQQHS CLFEKLLDGT PSIIISNGEI NLEMMKKQKL TMNDILEELR
SAGYLDISDI QYAIIETNGT ISIIPKSACD NVKRKDLKIK ESESKIPIVL LENGNLNKKV
LKQINKDENW LDEKLKSLNY PPRDKLFLVM IDSNGKLFIQ RKNQKDKEDI IL