Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1348 |
Symbol | |
ID | 4204236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1522356 |
End bp | 1523054 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565902 |
Product | hypothetical protein |
Protein accession | YP_698668 |
Protein GI | 110802995 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAATAA CTTTTATAAG AACAGCAATA CTTTATTTCA TTGTAATTGT AAGTATTAGA CTTATGGGTA AACGTCAAGT TGGAGAATTG CAACCTTACG AGCTTGTAAT AACCTTAATG CTATCTGATT TAGCATCCTT ACCAATGCAA GATACTCGTC TTCCGCTCCT TTTAGGCATA GTACCTATAA TTACACTTTT ATTTATAAAA ATATTAATAT CTGAAATCCA ACAACATAGC TGTTTATTTG AAAAACTTCT AGATGGTACT CCTTCCATAA TAATAAGCAA TGGAGAAATC AACCTAGAAA TGATGAAAAA ACAAAAACTA ACAATGAACG ATATATTAGA AGAATTAAGA AGCGCTGGTT ATTTAGATAT AAGCGATATT CAATATGCAA TTATAGAAAC TAATGGAACC ATATCTATTA TTCCTAAAAG CGCTTGTGAT AATGTTAAGA GAAAAGATTT GAAAATTAAA GAAAGTGAAT CAAAAATTCC AATTGTTTTA TTAGAAAATG GTAATTTAAA TAAAAAAGTT CTAAAACAAA TTAATAAAGA TGAAAACTGG TTAGATGAAA AATTAAAATC TCTTAATTAT CCACCTAGAG ATAAATTATT TCTAGTTATG ATAGATTCTA ATGGTAAATT ATTTATTCAA AGAAAAAATC AGAAAGATAA GGAGGACATA ATACTATGA
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Protein sequence | MLITFIRTAI LYFIVIVSIR LMGKRQVGEL QPYELVITLM LSDLASLPMQ DTRLPLLLGI VPIITLLFIK ILISEIQQHS CLFEKLLDGT PSIIISNGEI NLEMMKKQKL TMNDILEELR SAGYLDISDI QYAIIETNGT ISIIPKSACD NVKRKDLKIK ESESKIPIVL LENGNLNKKV LKQINKDENW LDEKLKSLNY PPRDKLFLVM IDSNGKLFIQ RKNQKDKEDI IL
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