Gene CPR_1336 details

Gene Information

• Locus tag: CPR_1336
• Symbol: thiE
• ID: 4204047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1507732
• End bp: 1508355
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642565890
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_698656
• Protein GI: 110801454
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.108459
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATA AAGATTACAA AAAATTATAT TTAGTAACAG ACTATAGAAT TCCTTTTAAT 
GAGCTTTTAG AAAAAACAAA GGAAGCTTTA ATTGGAGGGG TATCCATTGT TCAATATAGG 
GCAAAGAATA AAGAAACTAA AGAAATGTGT AAAGAAGCTA GAGCTTTAAA AAAGCTTTGT 
GATGAGTTTG GAGCATTATT CTTAGTAAAT GATAGAATTG ATGTAGCCTT AGCAGTAAAA 
GCTCATGGAG TTCATATAGG GCAAGATGAT ATGGATGTTT CTATAGCAAG AGAAATAATG 
CCAAAGGATG CAATTATAGG TGTTACTGTT CATAATAAAG AGGAAGCTTT AAAAGCTATA 
AAAGATGGAG CAGATAACTT AGGTGTTGGA GCTTTATTTT CAACTAATAG CAAAGATGAT 
GCAACATTAA TGACTTTAGA AACCTTAAGA GAGATAAAAT CAGTCTCTAA TATTCCACTT 
TATGGAATAG GGGGTATAAC TCCTTATAAC TTGAATAAGG ATATTTTAGA AAATCTAGAT 
GGGGTAGCTG TCATATCTGC TTTGTTAAAT AGTGATAATA TAAGAGAAAA AAGCAAGGAA 
TTTTTAAATA TTCTTAGTAA ATAA 

 

Protein sequence

MSNKDYKKLY LVTDYRIPFN ELLEKTKEAL IGGVSIVQYR AKNKETKEMC KEARALKKLC 
DEFGALFLVN DRIDVALAVK AHGVHIGQDD MDVSIAREIM PKDAIIGVTV HNKEEALKAI 
KDGADNLGVG ALFSTNSKDD ATLMTLETLR EIKSVSNIPL YGIGGITPYN LNKDILENLD 
GVAVISALLN SDNIREKSKE FLNILSK