| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1328 |
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| Symbol | |
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| ID | 4206353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1498428 |
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| End bp | 1499324 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565882 |
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| Product | putative lipid kinase |
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| Protein accession | YP_698648 |
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| Protein GI | 110803424 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0123469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGGGTA AGACATTGAA GAAAGTAAGA TTTATATATA ATCCATATTC GGGCGAGAAT
GCTATTTTAA AGGAACTTGA TAAAATAATT ACTATGCATC AAGATAAGGG ATATACTATA
GTTCCCTATA GAATTCAAAG GGGAGTAGAT GTAATAAATG CTCTAGACAT AATAGACTCT
ACTTATGAAT ACATACTTAT AGCAGGTGGA GATGGAACTA TAGACACTGT TGTAAATGCT
ATGAAAAAAA GAGGAATAGA AATTCCAATA GGAATTATTC CAGTAGGAAC AGCAAATGAT
TTTGCAAAAC ATTTAGGTAT GCCTCAAGAT GCAGGTGCAT GTGTTGAGCA AATATTAGAT
TCTTATGCAG TTGGAGTAGA CCTAGGTAAG GTAAATGATA ATTACTTTGT AAATGTATTA
TCTACAGGGT TATTTACTGA TGTATCTCAA AAAACAGATA CAAATTTAAA AAATACAATA
GGTAAATTAG CATATTATTT AAAAGGTTTA GAGGAATTGC CTAACTTTAG AAAACTAGAT
GTTAAAATAA CTGCTAATGG CAAGGTATTT AATGAGCCTA TATATTTAAT GCTTGTGTTT
AATGGTCAAA CAGCAGGAAA CTTTAAATTA GCAACTAAGG CCAAGGTTCA GGATGGGCTT
TTAGATATAG TTATATTTAA GGCTTGTCAT ATTCCAGAAT TAATACCTAT GTTTATAAAG
GTATTAAAGG GAGAACACTT AGAAGATTCT AGAATTGAGT ATATAAGAAC AGATGAACTT
CTTATAGAAT CTGATGAGGA AATAGTTACA GATATAGATG GAGAGAGAGG GCCAGATTTC
CCATTAAGAG TTCAATGTAT TAAAGATGGA ATACAAGTTT TAGGAATAAA TAAGTAA
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| Protein sequence | MEGKTLKKVR FIYNPYSGEN AILKELDKII TMHQDKGYTI VPYRIQRGVD VINALDIIDS
TYEYILIAGG DGTIDTVVNA MKKRGIEIPI GIIPVGTAND FAKHLGMPQD AGACVEQILD
SYAVGVDLGK VNDNYFVNVL STGLFTDVSQ KTDTNLKNTI GKLAYYLKGL EELPNFRKLD
VKITANGKVF NEPIYLMLVF NGQTAGNFKL ATKAKVQDGL LDIVIFKACH IPELIPMFIK
VLKGEHLEDS RIEYIRTDEL LIESDEEIVT DIDGERGPDF PLRVQCIKDG IQVLGINK
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