| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1325 |
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| Symbol | |
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| ID | 4206174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1496167 |
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| End bp | 1496808 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642565879 |
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| Product | glutamine ABC transporter permease |
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| Protein accession | YP_698645 |
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| Protein GI | 110803729 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000607084 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATTATA TTATTACTTT AATGCCATCA ATAATAGAAG GCTTAAAAAA TACATTAGGT
GTTTTTATAT TAACACTACT TTTATCTATT CCTTTAGGAA TGATAGTTGC AATACTTAGA
TTATCAAATA TTAAAATAGT AAACTTTATA TCATCTTTAT ATGTTTTAGT TATGCGTGGA
ACCCCTTTAT TATTACAACT AATATTTATA TTTTTTGGAC TACCAATAAT AGGAATTAGC
ATAGATAGAT TCCCAGCTGC CATAATAGCA TTCACCTTAA ATTACGCAGC TTATTTTGGC
GAAATATTTA GGTCTGGTAT AAAAGATATT GATAAAGGAC AATTTGAAGC AAGTAAAATC
CTAGGTCTTT CAAAATGGTT TACCTTTAAA AAGATAATTC TTCCTCAATC ATTTAAAAAG
ACTTTGCCTT CAATTACTAA TGAAGTTATT ACTTTAGTTA AAGATACATC CTTAGTTTAT
GTAGTTGGCA TAGGTGAACT TTTAAGAGCT GGTAAAATTG CAAGTAACAG AGATGCTTCT
CTCCTTCCCT TGTTTTTAAT AGGCATAATA TATCTATTGT TAATAGGAAT TCTAACTAAA
ATATTTAATA GGTTAGAGAA AAAATATTCA TATTATAATT AG
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| Protein sequence | MNYIITLMPS IIEGLKNTLG VFILTLLLSI PLGMIVAILR LSNIKIVNFI SSLYVLVMRG
TPLLLQLIFI FFGLPIIGIS IDRFPAAIIA FTLNYAAYFG EIFRSGIKDI DKGQFEASKI
LGLSKWFTFK KIILPQSFKK TLPSITNEVI TLVKDTSLVY VVGIGELLRA GKIASNRDAS
LLPLFLIGII YLLLIGILTK IFNRLEKKYS YYN
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