Gene CPR_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1318 
Symbolnth 
ID4205496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1489495 
End bp1490124 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content30% 
IMG OID642565872 
Productendonuclease III 
Protein accessionYP_698638 
Protein GI110802211 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000293814 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GAACTAAAGA GGTATTAGAA ATATTAAAAG AAGAGTATCC AGATGCTAAA 
TGTGAGCTAA ATTATGAAAC TCCCTTTCAA CTTTTAGTTG CTACTATTTT ATCAGCACAG 
ACTACGGATA AAAAGGTTAA TGAGGTAACT AAAGGGCTTT TTAAAGATTA TCCAGATGTA 
GATTCTTTTT TAACTATAAG TCAAGAGGAG CTAGAGGATA GAATAAAGCA AATAGGACTT 
TATAGAAATA AAGCTAAAAA TTTAATTATG ATGGTTCGTC AATTAAAAGA AAATTTTGGT 
GGAGAAGTTC CTAAAACTAT GGAAGGAATA ACTTCTTTAG CTGGGGCAGG AAGAAAAACT 
GCCAATGTGG TTTTATCAAA TGCCTTTGGA GTTCCATCTA TTGCAGTAGA TACTCATGTA 
TTTAGAGTTT CAAATAGAAT TGGTTTAGCA CATTCAGATA ATGTACTTGA AACTGAAAAA 
CAACTTCAAA AAGAATTACC TAAAAAAGAA TGGTCCTTAG CTCATCATCT TTTAATTTTT 
CATGGGAGAA GATGTTGTAT GGCTAGAAAG CCTAAATGTG ATATATGTAA GATCAATAAA 
TATTGTGATT ATTTTAAAAA TAATAGATAA
 
Protein sequence
MKKRTKEVLE ILKEEYPDAK CELNYETPFQ LLVATILSAQ TTDKKVNEVT KGLFKDYPDV 
DSFLTISQEE LEDRIKQIGL YRNKAKNLIM MVRQLKENFG GEVPKTMEGI TSLAGAGRKT 
ANVVLSNAFG VPSIAVDTHV FRVSNRIGLA HSDNVLETEK QLQKELPKKE WSLAHHLLIF 
HGRRCCMARK PKCDICKINK YCDYFKNNR