| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1312 |
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| Symbol | ddl |
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| ID | 4206010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1483729 |
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| End bp | 1484634 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565868 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_698634 |
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| Protein GI | 110803915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0281442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG GAGTAATAAT GGGAGGCATT TCTTCAGAAA GAGAGATATC AATACAAAGT
GGTAATTCTG TAGTTCATGC CTTAGATAAA GATAAATATG AAGCTATTCC TATAGTTTTA
AATGAAAAGG AAGACTTAAT AGAAAAGGTT AAAGGAATTG ATTTTGCTCT TTTAGCTTTA
CATGGAAAAT TTGGTGAAGA TGGAACTGTT CAATCTGTTC TTAAAACTTT AGGAATACCA
TTTTCAGGAT GTGGTCCATT AAGTAGTGCT ATATGTATGG ATAAGGACAT GACAAAGAGA
ATTTTAGCCT TTGGAAATGT TAGAACAGCA AGATGGGTAA TGGTTTCATC AGTAGATGAA
ATAGACTATG AAAAAATAGA AAATTTAGGT TATCCAGTAT TTATAAAACC TAATAATGGG
GGATCATCAG TTGCTACAAC TTTAGTTGAA TCTAAAGAAG CAGTTAAGGA TGCTGTATTA
GAAGCCTTAA AATATGATAC AGAAGTAATG ATTGAAGAAT ACATTAAAGG TGATGAGATA
ACTTGTCCTA TAATTGATGG GAAAATGTTA CCTGTTTTAG CTATAAAACC AAAGGGGAAA
TTCTTTGATA TAGCTTCAAA GTATGAAGAT GGAGGAGCAG ATGAATTTAT AGTTAAATTA
AATGAAGATC TTCATAAAGA AGTAGAAAAA ATGGCCTTAG AAACTTACAA GTTATTAAAA
TGTGACGTAT ATGCTAGAGT AGACATGCTA GTAAGGGATA ATGTTCCATA TGTATTAGAA
GTAAATACAT TACCTGGTAT GACAAAGAAT AGTTTATTCC CTAAAAGTGC AGCAGGAATA
AATATGAGTT TTGAAGAACT TTTAGATACA ATAATAGAAA AATCTTTAAA GGTTAATAGA
GAATAA
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| Protein sequence | MKVGVIMGGI SSEREISIQS GNSVVHALDK DKYEAIPIVL NEKEDLIEKV KGIDFALLAL
HGKFGEDGTV QSVLKTLGIP FSGCGPLSSA ICMDKDMTKR ILAFGNVRTA RWVMVSSVDE
IDYEKIENLG YPVFIKPNNG GSSVATTLVE SKEAVKDAVL EALKYDTEVM IEEYIKGDEI
TCPIIDGKML PVLAIKPKGK FFDIASKYED GGADEFIVKL NEDLHKEVEK MALETYKLLK
CDVYARVDML VRDNVPYVLE VNTLPGMTKN SLFPKSAAGI NMSFEELLDT IIEKSLKVNR
E
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