Gene CPR_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1311 
Symbol 
ID4204085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1482702 
End bp1483655 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content31% 
IMG OID642565867 
Productautolytic lysozyme, putative 
Protein accessionYP_698633 
Protein GI110801493 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.23164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA AAAATCCATT AAGTAGATTT GGTCCAGATT TAAATGAATT TAGTAGAGAT 
GTTAATTTTT CAATACTATC TAAAAATTCA GATTTTATTT ATTTAAGAGC TTCAGGCTCT
GGAACAGGTA AACTAAGAAT TGATAATAAG TTTTTAGAGT TTTCAAAAGA ATGCAGAAGA
TTAGGAATTC CATGTGGTGC ATATCATTTT GGTAAACCTT CTAAGGATTT AGATAGTGCT
GTTATTCAAG CAGATCAATT TATTGATGTT TTGCAACAAG GCTTTGGAGA TGGCGAGTAT
GGAGATTTAT TTCCGGTATT AGATGTGGAA ACTCCTACGG ATAAATCTTT AACTACTACA
GAACTTGTAA ATTGGATTGA TAGATTTAGA GATAGATTTG AAGAGAAAAC CAGAAGACGC
TTAATGCTAT ATACAGGATT ATTCTTCATA GTTCTATATG ATGATTTTAA GGTTCCAGGA
AAAGGATACC CTTTAAGTGA TATGCCTTTA TGGATTGCTA TGTACACTAA AATTCCTTCT
AATCCAAGGG TTCCACCAAA TGTTGGAGGA TGGAAGAGAT GGACTGTGTG GCAATTTACT
GATGAAGGAA AATTAGATGG AGTTGGAAGT CCAGTAGATT TAAACTGGGG GCCAAATAGC
ATAGATGGTT TAATGCCACC TTCTGCAGTT ACTGGACTAT ACGCATATAT ATCTGGAAAT
AAAATATTTG TTACTTGGAG AGCTAATAAA GAAGATGATT TAAATGGATA TAATGTTTTT
GTAAATGATA ATTATGCAGC AACATTACCG AGAAAAGCAA CTAAAATTGT AATTGATAAA
AGTAGATTTT ATCTTCCAAA AGGAAAGCCA ATAAAAATAT CAATAGAAGC ATTTGATATT
ACTGGAGACT TTTCAAAAGA AAGAACTGAA TATATTTTAG ATAATAATGG TTAA
 
Protein sequence
MQDKNPLSRF GPDLNEFSRD VNFSILSKNS DFIYLRASGS GTGKLRIDNK FLEFSKECRR 
LGIPCGAYHF GKPSKDLDSA VIQADQFIDV LQQGFGDGEY GDLFPVLDVE TPTDKSLTTT
ELVNWIDRFR DRFEEKTRRR LMLYTGLFFI VLYDDFKVPG KGYPLSDMPL WIAMYTKIPS
NPRVPPNVGG WKRWTVWQFT DEGKLDGVGS PVDLNWGPNS IDGLMPPSAV TGLYAYISGN
KIFVTWRANK EDDLNGYNVF VNDNYAATLP RKATKIVIDK SRFYLPKGKP IKISIEAFDI
TGDFSKERTE YILDNNG