Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1311 |
Symbol | |
ID | 4204085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1482702 |
End bp | 1483655 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565867 |
Product | autolytic lysozyme, putative |
Protein accession | YP_698633 |
Protein GI | 110801493 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.23164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATA AAAATCCATT AAGTAGATTT GGTCCAGATT TAAATGAATT TAGTAGAGAT GTTAATTTTT CAATACTATC TAAAAATTCA GATTTTATTT ATTTAAGAGC TTCAGGCTCT GGAACAGGTA AACTAAGAAT TGATAATAAG TTTTTAGAGT TTTCAAAAGA ATGCAGAAGA TTAGGAATTC CATGTGGTGC ATATCATTTT GGTAAACCTT CTAAGGATTT AGATAGTGCT GTTATTCAAG CAGATCAATT TATTGATGTT TTGCAACAAG GCTTTGGAGA TGGCGAGTAT GGAGATTTAT TTCCGGTATT AGATGTGGAA ACTCCTACGG ATAAATCTTT AACTACTACA GAACTTGTAA ATTGGATTGA TAGATTTAGA GATAGATTTG AAGAGAAAAC CAGAAGACGC TTAATGCTAT ATACAGGATT ATTCTTCATA GTTCTATATG ATGATTTTAA GGTTCCAGGA AAAGGATACC CTTTAAGTGA TATGCCTTTA TGGATTGCTA TGTACACTAA AATTCCTTCT AATCCAAGGG TTCCACCAAA TGTTGGAGGA TGGAAGAGAT GGACTGTGTG GCAATTTACT GATGAAGGAA AATTAGATGG AGTTGGAAGT CCAGTAGATT TAAACTGGGG GCCAAATAGC ATAGATGGTT TAATGCCACC TTCTGCAGTT ACTGGACTAT ACGCATATAT ATCTGGAAAT AAAATATTTG TTACTTGGAG AGCTAATAAA GAAGATGATT TAAATGGATA TAATGTTTTT GTAAATGATA ATTATGCAGC AACATTACCG AGAAAAGCAA CTAAAATTGT AATTGATAAA AGTAGATTTT ATCTTCCAAA AGGAAAGCCA ATAAAAATAT CAATAGAAGC ATTTGATATT ACTGGAGACT TTTCAAAAGA AAGAACTGAA TATATTTTAG ATAATAATGG TTAA
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Protein sequence | MQDKNPLSRF GPDLNEFSRD VNFSILSKNS DFIYLRASGS GTGKLRIDNK FLEFSKECRR LGIPCGAYHF GKPSKDLDSA VIQADQFIDV LQQGFGDGEY GDLFPVLDVE TPTDKSLTTT ELVNWIDRFR DRFEEKTRRR LMLYTGLFFI VLYDDFKVPG KGYPLSDMPL WIAMYTKIPS NPRVPPNVGG WKRWTVWQFT DEGKLDGVGS PVDLNWGPNS IDGLMPPSAV TGLYAYISGN KIFVTWRANK EDDLNGYNVF VNDNYAATLP RKATKIVIDK SRFYLPKGKP IKISIEAFDI TGDFSKERTE YILDNNG
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