Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1299 |
Symbol | tpiA |
ID | 4204844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1469296 |
End bp | 1470042 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642565855 |
Product | triosephosphate isomerase |
Protein accession | YP_698621 |
Protein GI | 110802901 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.734425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACTC CAATAATCGC AGGAAACTGG AAAATGCACT ATACAATAGA TGAGGCTGTT AAATTAGTTG AAGAATTAAA GCCATTAGTT AAAGATGCTA AATGTGAAGT TGTTGTTTGC CCAACTTTTG TTTGCTTAGA TGCAGTTAAA AAAGCTGTTG AAGGAACAAA CATAAAAGTA GGTGCTCAAA ACATGCACTT TGAAGAAAAA GGAGCATTCA CTGGAGAAAT CGCTCCAAGA ATGTTAGAAG CTATGAACAT AGATTATGTT ATAATTGGAC ATAGTGAAAG AAGAGAATAC TTCAACGAAA CAGATGAAAC TTGCAACAAA AAAGTTAAAG CTGCTTTCGC ACACAACTTA ACTCCAATCC TTTGCTGTGG AGAAACTTTA GAGCAAAGAG AAAACGGAAC TACTAATGAC GTTATAAAAG CTCAAATAAC TGCTGATTTA GAAGGATTAA CTAAAGAGCA AGCTGAGAAA GTTGTTATAG CTTACGAACC AATCTGGGCT ATAGGAACTG GAAAAACTGC TACTTCAGAC CAAGCTAATG AAACAATAGC TGCTATAAGA GCTATGGTTG CTGAAATGTT CGGACAAGAA GTTGCTGATA AAGTAAGAAT CCAATACGGT GGATCAGTTA AGCCTAATAC AATAGCAGAG CAAATGGCTA AATCAGACAT CGATGGTGCT TTAGTTGGTG GAGCTAGCTT AGTTGCAGCT GACTTTGCTC AAATCGTAAA CTACTAA
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Protein sequence | MRTPIIAGNW KMHYTIDEAV KLVEELKPLV KDAKCEVVVC PTFVCLDAVK KAVEGTNIKV GAQNMHFEEK GAFTGEIAPR MLEAMNIDYV IIGHSERREY FNETDETCNK KVKAAFAHNL TPILCCGETL EQRENGTTND VIKAQITADL EGLTKEQAEK VVIAYEPIWA IGTGKTATSD QANETIAAIR AMVAEMFGQE VADKVRIQYG GSVKPNTIAE QMAKSDIDGA LVGGASLVAA DFAQIVNY
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