Gene CPR_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1289 
Symbol 
ID4206347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1457641 
End bp1458249 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content30% 
IMG OID642565845 
Productputative lipoprotein 
Protein accessionYP_698611 
Protein GI110803379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0505927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTT TAAAAGGGGT AATTTTAGCT ATGATTCCAG CAGTCTTGTT TATGGGATGT 
GGAGAGTTTT CTAAAAATGA TGTTGCAAAG GTAAGTTTTG AGCCGCTTTC AGAAAAAGAG 
GAGCAGATTT TAAATTTGAC TGACAATAGA GTTTTTTTCT ATAAGGTGAA AAATATTTCT 
AAAGGTAAGG GGTATAAGAT TGATTTAAGT TATGAGGTTT ATAAAGAGGG AAAAGAAGTT 
AAAAATGAAC CTATTTTAAC AAGTGTAAGT GAAACCTATG AAAAGGGGAA AGAGAATATA 
ACCTTAGGAA TAAACTTTAA AGATGATAAT AGGATAAATT GTCTTTTAGG AGGAGATGGA 
GTTTATAGTC GTCATAATTA CAAGTCTGAG GAAAATATAA AGGACTATTT AAGTGCTAAT 
TTTGCTGGTG ATTATGATTT AGAACTTGAA AAAGGAAAGA GAGTTTGTCT TTATTATGGA 
ACTTCAGGAA ATGGAATTAG TAGTAATGTT ATAGGAATGT ACATGGATTC AGAGGAAATA 
AAAGAAGCTA TTAATAAAAG CAAGGACTGT ATTTTCTTAA GTATAAGTGT AGAGGATTTT 
AGTGAGTAG
 
Protein sequence
MRVLKGVILA MIPAVLFMGC GEFSKNDVAK VSFEPLSEKE EQILNLTDNR VFFYKVKNIS 
KGKGYKIDLS YEVYKEGKEV KNEPILTSVS ETYEKGKENI TLGINFKDDN RINCLLGGDG 
VYSRHNYKSE ENIKDYLSAN FAGDYDLELE KGKRVCLYYG TSGNGISSNV IGMYMDSEEI 
KEAINKSKDC IFLSISVEDF SE