Gene CPR_1282 details

Gene Information

• Locus tag: CPR_1282
• ID: 4205387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1449932
• End bp: 1451830
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 642565838
• Product: hypothetical protein
• Protein accession: YP_698604
• Protein GI: 110802122
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0481957
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA CTATAATAAA GCAATTATTT AAAATTAATA AAACTCCTTT TCCTTGGCAA 
AAAGCAATAA ATGCTGGAAT CTGTGCAGGA TTTCCAGTAC TTATAGGAGT TCTAATAGGT 
CAAATTCGTT TAGGATTATT AGGTGGAATA GGAAGTTTTT CATATTTATA TGTTATAAAT 
GAGCCTTATG CTCAGCGTGG TAAAAAAATA TTGTTTGCAG CCATTGGTAT TAGCTTGTCA 
GTTGCTTTAG GAACTTTATT AGCTCCCTAC CCAATACTTA TTATATTAAT GGTAGGTTTA 
ATTGGAGGAA TTACAATTTT TATATTTGGT CTTTTAAAAA TACCAGGACC TTCTTCAATG 
TTCTTTGTAT TAAGTTTTTT AGTATCAACA GGAATGCCTG TTAATCAGTC AGAAGCGTTT 
ATAAGATTTT TTGTTGTTCT TATGGGAGGG CTTTTTGCAT GGTTAATGAG CATGAAGGGA 
TATTTTTTAA ATCCACATGG TCCTGAAATA AAAGTTATTA AAAGACTTTA TTTAACCTTA 
GCAGATTTTA GTGAAGCCAT TGGAAATGAA GATATTAATG ATATAAGAAA TAAAACTGTA 
AATGCTTTAA GGGAAGCAGA GGAAATTCTT TTAACTGGAT ATATTCCATG GAAGAATTCA 
TTCTTATTTA ATAGATTATA CCTTTTAAAT GAAGAGGGTA ATAAATTATT TTTAGAAATG 
CTTGAGTTGC ATGTTAATAA AAATAAGAAA TTACCAAAAG AATTTAGTAA TATGATAAGA 
AAGTTAGCTA TGGCAATTGA CTTTAAGGAT GGAGACAAGC TTAAGATAGA TTCTTATGAA 
AACTTAGATA TGGATTACCA TAAGCTTTTA CAAATAATTT ATGATACTGA AGCTATAATT 
AATTTGCCAT TAACATACAT TGGAAGAAGC ATTAAAATTT CAAAAACTTC ATTAATGAGT 
AAGGTTAAAA GAGCTTGTAA TAAAGATTCA ATAGTATTTA TTAATGCAAT TAGATATGGG 
GTTGTTCTTT CTATATCAGC TATAATAGCC TTTAGTTTTC CTTTTTCAAG GCCATACTGG 
ATACCTTTAT CCTGTGCTGC TGTCATGTCA GGTTCAACTA TTATATCAAC CTTTCATAAA 
TCAATTCAAA GATCCTTTGG TACAATTATT GGAGTAATAA TAGCTACTAT TATTTTAAAA 
ACAAATCCAA ATGGTTTTAT AATAGTTATA ATTAATATGA TTTTAACAGC TTTAACAGAA 
CTTTTTATTG TAAAAAATTA TGCCATAGCA GTAATGTTTA TTACGCCAAA TGCTTTACTT 
ATAGCAGAGA CTTCAACACA AATACATAAT ATTACTTATT TTGCAACAGC ACGTATTACT 
GATATAGTGG TAGGTTCTTT AATAGGTTTA ATAGGTATTT ATATTTTTGG ACGACGCTCA 
GCTTCTAGTA GAGTAAAGGA TTTAATAGTA AAATTAATAC ATAGTCAAAA GAATTTATTA 
GTTCTCCTAT CAACTAATGA TAAAGAAATT AATAATAAAA AGATAAAAAA TATGAAAGAA 
AAAATGGGTG TAGACTTAAT GAATCTTAAG ATGGCATATA ACACTGCCTT AGGGGAAGTT 
CCTCGTAATG AGGAAATGCT TGAAATGCTA TGGCCTGTAT TCTTTTCTTT AGAGCATATT 
AGTTACTTAC TAGATAAGTA TTGTACAACT AAGAAATATT TAAATTTATC TGATGATGAA 
TTAGCCCAAT TATTACTTGT ATTAGAGAAA ATAGCAATAT TTATTGAGCA GGGAATAGAT 
GTAAAACCTA AAAAGGTTCC TAATATAAAG GAAATATCTC AAATTTGCGA AGAATTTAAT 
TCTATACAAA GGGTATTTTA TATTAAATCT CATAAATAA 

 

Protein sequence

MDKTIIKQLF KINKTPFPWQ KAINAGICAG FPVLIGVLIG QIRLGLLGGI GSFSYLYVIN 
EPYAQRGKKI LFAAIGISLS VALGTLLAPY PILIILMVGL IGGITIFIFG LLKIPGPSSM 
FFVLSFLVST GMPVNQSEAF IRFFVVLMGG LFAWLMSMKG YFLNPHGPEI KVIKRLYLTL 
ADFSEAIGNE DINDIRNKTV NALREAEEIL LTGYIPWKNS FLFNRLYLLN EEGNKLFLEM 
LELHVNKNKK LPKEFSNMIR KLAMAIDFKD GDKLKIDSYE NLDMDYHKLL QIIYDTEAII 
NLPLTYIGRS IKISKTSLMS KVKRACNKDS IVFINAIRYG VVLSISAIIA FSFPFSRPYW 
IPLSCAAVMS GSTIISTFHK SIQRSFGTII GVIIATIILK TNPNGFIIVI INMILTALTE 
LFIVKNYAIA VMFITPNALL IAETSTQIHN ITYFATARIT DIVVGSLIGL IGIYIFGRRS 
ASSRVKDLIV KLIHSQKNLL VLLSTNDKEI NNKKIKNMKE KMGVDLMNLK MAYNTALGEV 
PRNEEMLEML WPVFFSLEHI SYLLDKYCTT KKYLNLSDDE LAQLLLVLEK IAIFIEQGID 
VKPKKVPNIK EISQICEEFN SIQRVFYIKS HK