| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1281 |
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| Symbol | |
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| ID | 4205948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1448374 |
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| End bp | 1449555 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565837 |
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| Product | pyrimidine nucleoside transporter |
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| Protein accession | YP_698603 |
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| Protein GI | 110803969 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00013711 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA TTATTGGAGT TGTAGGATTA ATTGTTATTT TAGCACTTGC GTGGATTGGA
AGTAGTGATA AGAAAAATAT AAAATATAAG CCTATATTTT TAATGCTTAT TTTACAATTC
GTATTAGGAT TTATACTTTT AAATACTCAA GTTGGAAATT ATTTAGTTGG AAGTATAGCA
AATGGGTTTC AACTTCTTCT AGATTGTGCT GGAGATGGGG TAAATTTTGT ATTTGGTGGA
TTAGTTAATA ATAATCAATT TTCATTCTTT ATTAGTGTTC TTTTACCAAT AATCTTTATT
TCTGCCTTAA TTGGTATTTT ACAATACTTG AAAATACTTC CTTTTGTAAT TAAATACATA
GGTTTAGTTT TAAGTAAAAT TAATGGCATG GGTAAATTAG AGTCTTATAA TGCTGTGGCA
TCAGCTATAC TTGGTCAATC AGAAGTATTT ATTTCTGTAA AAAAAGAACT TGGTTTATTA
CCTAAACATA GATTATATAC TTTGTGTGCA TCAGCAATGT CAACAGTATC TATGTCTATA
GTTGGTTCTT ACATGGTTTT ATTACAACCT AGATATGTTG TAACAGCAAT TGTTCTTAAT
TTATTTGGTG GATTCATTAT AGCATCAGTT ATAAATCCAT ATTCTGTATC TAAAGAAGAG
GATATTTTAG TAGTTGAAGA CGAAAAGAAA CAAACATTCT TTGAAGTGCT TGGTGAATAT
ATTTTAGATG GATTTAAGGT AGCAGTTATA GTAGCAGCTA TGTTAGTTGG ATTTGTAGCA
ATTATTGCTG TAATAAACAT GATATTTAGA GCAATCTTTG GAATGAGCTT CCAAGATATA
CTAGGATACG TATTCTCACC TTTTGCATTC TTAATGGGTG TACCTTTAAA TGAGTCAATA
CAAGCAGCCA GTGTAATGGC AACAAAGCTA GTATCTAATG AGTTTGTTGC AATGAATTTA
TTATCAAGTG GAAATTTAAA TTTATCAGCA AGATCAATTG GTATTGTTTC TGTATTTTTA
ATTTCTTTTG CAAATTTCTC ATCAATTGGA ATTATTTCAG GAGCAGTAAA AGGGCTTAAC
CAAGAACAAG GAAATGTGGT TGCACGTTTC GGACTTAAAT TACTATATGG TGCAACATTA
GTAAGTATGT TAACAGCAAC TATTGTTGGA TTAATTATAT AA
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| Protein sequence | MKYIIGVVGL IVILALAWIG SSDKKNIKYK PIFLMLILQF VLGFILLNTQ VGNYLVGSIA
NGFQLLLDCA GDGVNFVFGG LVNNNQFSFF ISVLLPIIFI SALIGILQYL KILPFVIKYI
GLVLSKINGM GKLESYNAVA SAILGQSEVF ISVKKELGLL PKHRLYTLCA SAMSTVSMSI
VGSYMVLLQP RYVVTAIVLN LFGGFIIASV INPYSVSKEE DILVVEDEKK QTFFEVLGEY
ILDGFKVAVI VAAMLVGFVA IIAVINMIFR AIFGMSFQDI LGYVFSPFAF LMGVPLNESI
QAASVMATKL VSNEFVAMNL LSSGNLNLSA RSIGIVSVFL ISFANFSSIG IISGAVKGLN
QEQGNVVARF GLKLLYGATL VSMLTATIVG LII
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