| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1278 |
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| Symbol | |
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| ID | 4204756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1440592 |
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| End bp | 1444989 |
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| Gene Length | 4398 bp |
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| Protein Length | 1465 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565834 |
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| Product | leucine rich repeat domain-containing protein |
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| Protein accession | YP_698600 |
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| Protein GI | 110802272 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0180436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA GAAAAATAGC AGCTATAATT TTAGCTACCA TGATTACAAA TCTTTCTGCT
ACAACAATTG ATGTTTTAGC ACAGGAATTA AACACTAAAG ACAATTCTAA GGTAGAAGTT
AGTCATAATG ATGAATCACA TCAAGCAAGA GTAAGTAAGT TTGATTTATA TAATAGTGAT
AAATTAGACG CTTATAATCA AGAATTTCAA ATCAGCAGAT CAAATATAAA ATCCATAAAT
AATAATGGTG GAAAGTATAA TAGTTCCACT ATTGATAAAG CCATAGATGG CAATTTAGAA
ACTCATTGGG AAACAGGAAA ACCTAATGAT TCAAATTTTA CAAATGAAGT AGTAGTTACA
TTTAATGAAA TAACTAATAT AGATAGAATT GTATATTCTG CAAGAAGAGA CTCTGCAAGG
GGAAAAGGCT TTGCAAAAGA ATTTGAAATA TATGCTTCTC TTAAAGATGA GGGAGATGAT
TTTAGCTTAG TAAGCAGTGG AAAATATACA GAATCAATTA GAGATTTAGT TGAAATAAAG
TTTAATCCAA CTGACTTTAA AAGATTAAAG TTTAAATTTA AAAAGGCTGA ACAAAACTGG
GCTTCAGCAG CAGAATTTAT GTTTTATAAA CCAGATGAAG TTTATTCTTC AATACCTAAG
CTTTTTACAG ACGGTACTAT GAGTGAGCTT AGTAAAGAAT TTAATAGTTT AGAAAAAATA
AATGCCTTTA AAGAAAAAAT TAAAAATCAT CCACTATATA ATGACTTTAA AGAAATTACA
GACTTAGCTG AATCATTAAT TTCTAATTCA AAAAAAGAGG ATGTACTTGA ATTAGAAATG
AGAGGAGACT CTATAAGTGA GGCTCAAAAG AGAAAAGTAT GGAATTTCCA AGATTGGCAA
ATAACAGGAT TATCTGCTAG AGCTGGAGAT AAAATAAATG TATATGTGGA TGTAGCAGAA
GGTGATCCTA CTCCAACGTT ATTATATAAA CAATCTTTAA CTCAACATGG TGGATCAACA
AATTTTCAAT TAAAGCCTGG TAAAAATGAA ATAACTATAC CAGAAATAAA TTATGAATCT
AATGGAATAC CTAAGGATGT TATTCAAGGG GGAGATTTAT TCTTCACTAA TTATAGAAGT
GATAATCAAA AGAGAGCACC AAAGGTAAGA ATAGAAGGGG CAAGCAAATA TCCTGTATTT
ATTCTAGGAA AATCAGATGA AAATGAAGTA ATGAAAGAGT TAGAAGCCTA TGTTGAAAAA
ATTAAAGCAG AACCTAATAC TACTCCAAAT ATTTTTGCAG TAAGTTCTAA GAAATCATTA
GAATTTGTAC AAGCTACTTA TGCATTAGAT TGGTATAAGA AAAATAACAA AACTCCAAAG
TACACAGCGG AGCAATGGGA TCAATATATA GCTGATGCTA TGGAATTCTG GGGATTTGAT
AACTCAAAAG ATGTTAATTC AGATTTTAAT TTTAGAATAA TGCCTATGGT TAAAAATCTT
AGTGGTGGAG CATTCATGAA TGCTGGAAAT GGTGTTATAG GTATAAGACC TGGAAATCAG
GATGCAATAC TTGCAGCTAA TAAAGGATGG GGTGTTGCTC ATGAGCTTGG ACATAATTTT
GATACAGGGG GAAGAACCAT AGTAGAAGTA ACGAATAATA TTATGCCATT ATTCTTTGAA
TCTAAATTCA AAACTAGAAC AAGAATAACT GAACAAAACA TATGGGAAAA TAATACCTAC
CCTAAAGTTG GCTTAGATGA TTATTCTAAT AATGAGTTAT ATAATAAAGA TGACAGTACT
CATTTAGCTC AGTTAGCACC ATTATGGCAA TTATATTTAT ATGATAATAC TTTCTATGGA
AAGTTTGAAA GACAGTTTAG AGAAAGAGAT TTTGGAAATA AAAATAGAGA AGATATATAT
AAATCTTGGG TTGTGGCAGC GTCAGATGCT ATGGAGTTAG ATTTAACTGA GTTCTTTGCA
AGACATGGTA TTCGTGTTGA TGATAAGGTT AAAGATGATT TAGCTAAGTA TCCAAAGCCT
GATAAAAAGA TCTATTACTT AAATGATTTA GCAATGAATT ATAAAGGTGA TGGATTTACA
GATAATGCAA AGGTATCTGT AAGCACAAGT GGTTCAAATG GTAATATAAA ACTTTCATTT
TCGGTAGATG ATGAAAATAA AGATAATATA CTTGGATATG AAATACGCAG AGATGGAAAG
TATGTAGGAT TTACTTCTAA TGATATGTTT GTTGATACTA AATCTAATTT AGATGAGGAT
GGTGTATATG TAGTAACACC ATATGATAGA AAGTTAAATA CCTTAAATCC AATAGAGGTA
AATGCATTGC AATCAACTTT ATCTGTAAAC CCAGTGATTA CACTAGCTTT AGGTGAGGAG
TTTAAGCCAG AAGAATATAT TGTGGCTAAG GACATAAAAG GTAATTCTTT AAGTGAATCC
GTAAAAATTA AATCAAGCAA TGTAAATACT TCTAAAGTTG GAGAATATGA AGTCTTATAT
AGCTTAGAAG ATTCTAAAGG AAATAAATAC ACTAAAACTT CTAAGGTTAA TGTGGTAAGT
AGAAAAGAGT ATATGAGTGA TTTAACTCCT AAAAAATCTT CAAATGGATG GGGAACTGTT
AGAAAAGATA AGAGCATAAG TGGAGGAGTA ATAGGTCTTA CAAGAGATGG AGACTTTGTT
GACTACGATA AGGGATTAGG TCTTCATTCA AATGCGGAGT ATGTATATGA TTTAGAAGGG
AAAGATTATG ACTACTTTGA ATCTTATGTA GGTGTTGATA AAGCAATGTC ACCTAGACCA
TCCTCTTCAG TTATTTTTAA GGTTTTAGTT GATGGAGAAG AAAAGTTTAA TAGTGGAGTA
ATGAGAAGTA CAACACCTCA AAAATATGTT AAGGTGAATG TAAAAAATGC TAAGGAGCTA
AAATTAATAG TAAATGATGC TGGAGATGGA GATAGTTCAG ATCATGCAAG CTTTGGAGAT
GCTAAATTAG CTACTTTATC TTCAAAACCA ATAATTAAAG GTGAAAATTT AGCTTATAAT
ATGAATGAAA AAGTAGATTT AATGAAAGGA ATAACTGCAA CAGATATTGA AGATGGAAAT
ATAACTTCTA AAGTACAAAT AAAATCTTCA GACTTTGTTG AAGGAAAGTC AGGAATATTT
AAAGTTGTGT ACTCAGTAAC AGATAGTGAT GGATTAACCT CTGAATTTTC AAGAACTATA
GCAGTTACAG ATAAAGAAAC TCAGTTATCT GATTTAAATT GGAAATCTGC AACTATAGGA
TCAGGTTCTG TAAGAAAAGA TAGAACAGTA AGTGGAAATC AAATAAGATT ATTAAATGAA
GATAATTCTG TTGAAACCTT TGCTAAAGGA ATAGGAACTC ACTCATATTC AGAAATAGTT
TATAATTCAG AAGGATATGA TATATTTGAT ACTTGGGTAG GTATTGATAG ACATGTTGCA
GACAAAAAAG TTTCTAGTGT TAAGTTTAAA GTATATGTTG ATGGAGAATT AAAGGCTGAA
ACAGATGTAA TGAGAATTGA TACTCCAAAG AAACGTTTAG TTGTAGATAT AAGAAACTCT
AAAGAGATTA AATTAGTAGT AGATGTAGCT GATAATGGAA ACACTTGGGA TCATGCAGAC
TGGGCAGATG CTAAGTTTAG AAATTTAGCG GAGTATGATG CATCAGAGTT AAATAAGGCA
CTAGAAGAGG CTAAGAAATT AGACTTAAAT AATTACACAG AAGAAAGTTC TGAAGCTTTA
AAAAGTGCAA TATCAAAGGG AGAAGAAGCC TTACTTTCTA AAGATAAAGA GACAATAAAT
TCTGCCCTTG AAGAGTTAAA TAAGGCAATG GATTCTTTAG TAAAAGTAGA TTTAAATGAT
GTTATTAATA TACCAGATAA ATATTTACTT AAATCTATTC AAAATCAATT AAATAAAACT
GGAGATATAA CTTTAGGGGA CATGTACAGC TTAACTACAT TAAGATTAAG TGGAGTTTTT
GATTTAACAG GCTTAGAAAA TGCTAAAAAT TTAGAAACTT TAAATATGGA TTATAATGAA
GTTAAAGACT TAAGACCTTT ATCAAAATTA AAGAAGCTTA ATACATTAAA TGCACATGAG
CAATTTATTG CAGCAGGAGA GTTAAAGCCT TCTAATGGTA AAGTTATAGG TGATTCAAAA
GTATATAATA GAGAAGGAAA AAATGTAGCT AAAACTATTA GGGTTGTTGA TAAAAATGGA
AATACAATTC TAGAACAAGA TGCTAAAGAT GAATTTACAA TAAACACTAA GGATTTGTCA
TCAGGATTAT ATGGTGTTCA TGTATTATTT GAAGATGAAG GTTTTAGTGG AGTAATGTTC
TATTTATTTA ATGTATAA
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| Protein sequence | MNKRKIAAII LATMITNLSA TTIDVLAQEL NTKDNSKVEV SHNDESHQAR VSKFDLYNSD
KLDAYNQEFQ ISRSNIKSIN NNGGKYNSST IDKAIDGNLE THWETGKPND SNFTNEVVVT
FNEITNIDRI VYSARRDSAR GKGFAKEFEI YASLKDEGDD FSLVSSGKYT ESIRDLVEIK
FNPTDFKRLK FKFKKAEQNW ASAAEFMFYK PDEVYSSIPK LFTDGTMSEL SKEFNSLEKI
NAFKEKIKNH PLYNDFKEIT DLAESLISNS KKEDVLELEM RGDSISEAQK RKVWNFQDWQ
ITGLSARAGD KINVYVDVAE GDPTPTLLYK QSLTQHGGST NFQLKPGKNE ITIPEINYES
NGIPKDVIQG GDLFFTNYRS DNQKRAPKVR IEGASKYPVF ILGKSDENEV MKELEAYVEK
IKAEPNTTPN IFAVSSKKSL EFVQATYALD WYKKNNKTPK YTAEQWDQYI ADAMEFWGFD
NSKDVNSDFN FRIMPMVKNL SGGAFMNAGN GVIGIRPGNQ DAILAANKGW GVAHELGHNF
DTGGRTIVEV TNNIMPLFFE SKFKTRTRIT EQNIWENNTY PKVGLDDYSN NELYNKDDST
HLAQLAPLWQ LYLYDNTFYG KFERQFRERD FGNKNREDIY KSWVVAASDA MELDLTEFFA
RHGIRVDDKV KDDLAKYPKP DKKIYYLNDL AMNYKGDGFT DNAKVSVSTS GSNGNIKLSF
SVDDENKDNI LGYEIRRDGK YVGFTSNDMF VDTKSNLDED GVYVVTPYDR KLNTLNPIEV
NALQSTLSVN PVITLALGEE FKPEEYIVAK DIKGNSLSES VKIKSSNVNT SKVGEYEVLY
SLEDSKGNKY TKTSKVNVVS RKEYMSDLTP KKSSNGWGTV RKDKSISGGV IGLTRDGDFV
DYDKGLGLHS NAEYVYDLEG KDYDYFESYV GVDKAMSPRP SSSVIFKVLV DGEEKFNSGV
MRSTTPQKYV KVNVKNAKEL KLIVNDAGDG DSSDHASFGD AKLATLSSKP IIKGENLAYN
MNEKVDLMKG ITATDIEDGN ITSKVQIKSS DFVEGKSGIF KVVYSVTDSD GLTSEFSRTI
AVTDKETQLS DLNWKSATIG SGSVRKDRTV SGNQIRLLNE DNSVETFAKG IGTHSYSEIV
YNSEGYDIFD TWVGIDRHVA DKKVSSVKFK VYVDGELKAE TDVMRIDTPK KRLVVDIRNS
KEIKLVVDVA DNGNTWDHAD WADAKFRNLA EYDASELNKA LEEAKKLDLN NYTEESSEAL
KSAISKGEEA LLSKDKETIN SALEELNKAM DSLVKVDLND VINIPDKYLL KSIQNQLNKT
GDITLGDMYS LTTLRLSGVF DLTGLENAKN LETLNMDYNE VKDLRPLSKL KKLNTLNAHE
QFIAAGELKP SNGKVIGDSK VYNREGKNVA KTIRVVDKNG NTILEQDAKD EFTINTKDLS
SGLYGVHVLF EDEGFSGVMF YLFNV
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