| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1276 |
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| Symbol | |
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| ID | 4206384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1437427 |
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| End bp | 1439343 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565832 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_698598 |
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| Protein GI | 110803513 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.557964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AATTACCTAA GGAAGCTTAT GGTGGTGTAA GTGGTAAAGA TTATGTTCCT
TATTTTACTG GTAAGTCAAA AAATGGAGTT AATCTTCCGG TACTAATAAT AGGTATAGTA
TTAGCTATTG TTTTTGCTGC TTCTACTGCT TATTCAGGTA TGAAATCAGG GTTAACTGTT
GCTGCTGGTA TACCTGGTGC TATCATAGGA TCAGTTTTTG TAGGAATATT TGCACGTAGT
AAAGGTATTC TTGGAAAAAA CATAACTCAA GGTATGGCAA GTGGAGGAGA ATCTATAGCA
AGTGGTATGA TATTTGTATT ACCAGCAATT ATACTAATAG GAAGTAAGTT TACTTTCTTA
GAAGGTGTAG CTGCAGGTGT AGGAGGAGTT CTATTTGGTA TAGGATGTCT ATCACTAGTT
TATAACTATC TAATAGTTGA GGAACATGGA AAACTTATGT ATCCTGAGTC AATGGCAATA
TCTGAAACAC TTGTTGCTTC TGAAGGAAGT GAAGACTCAA TTAAATTTAT GGGTATTGGA
TTTGTTATAA GTGGTATTAT AAATGTTTTA ACAGGATCAT TTTTAAACTT AATAAATAAC
ACTGTTACAT ATCTAGGAAG TAAATTTTAT AAGTGGAAAT TTTCTACTGA AGTAAACCCA
CTTTTACTTG GTATTGGGTT TATAGTTGGA TTAGAAGTAT CTCTTACTAT GTTTGCAGGA
TCTATACTTG CTAACTTTGG TATAGCTCCA TTAATAGGAT ATTTCAGTGA TATGGCAGAA
AAGAGCATGC ACTCATGGAA TGATGCTTCA ATGTTAATTC ACCAAATGGA TGTAAATGCA
ATATCAGGAA GTTATGTTAA GTATATAGGA GCAGGAATGA TGCTTTGTGG AGGTATTATA
GGGGCTATAA AACTTATACC AACTATAATA GTTTCAATAA AAGAAACATT AAAAGCAAGT
CCTGTTAACG AAGAAAATGC TGAAAAAAAT AGCGGATCTA TAATAATACT TTTAGTAGGA
GCTTTATTAG CTTTTGTTAT AGGATTCTTT ATTTCTAATA GTATTGCAAT GGCTATAACA
GGTGCAGTTG TTTCAATAAT CCTATCATTA CTATTTGTAA TAGTTGCAGG ACGTTTAACT
GGTACAATAG GAACATCAAA CCTTCCTGTA TCAGGTATGA CAATAGCTTC ATTAGTAATA
TTAACATTAG TATTCGTTAT AATGGGATGG ACTGGAAAAG CTGATAACAA AGCATTACTT
TTATTTGCTA CATTTATGGT TGTTTCAATC TCTGTAGCAG GTGGATATAG CCAATCTCAA
AAGGTAACAT ATATAATTGG TGGAAGCAAA AAAGAAATGC AAAACTCTTT CATGATTGCA
AGTATAGTTG GTGTTGTTGT TGTTACTGGA ACAATATTAG TACTTTCTAG CCAATTATCA
ATAACAGGAG CAGATGCACC TTTTGCATTA CCACAAGCTA ACTTAATGTC AACATTAACT
TCAGGTATAA TGGAAGGAAA CTTACCTTGG CCTATGATAA TTGTTGGAGT AGTTATGGCT
TTATTCTTAT ACTTAGTAGA CTTACCAATA ATGACTGTTG CAATAGGATT CTATTTACCT
ATATCAACAA CTTCTATAAT TTTAGTAGGT GCATTAATAC GTGTATTTAT TGAAAAAATG
AGCAAGAGTG AGCATGAAAA AGAAGTTAAA GTTTCAAATG GAATAAGTTT ATCTTCTGGT
CTTGTTGCTG GAGGATCTAT TGTGGGATTA ATAGGAATAG TTCTACAAGT AACAGGAATA
ATAACACCTG GAACACCAAC TGGTTTTGTA GCTAGCAATG GAATGGCAAT AATAGTACTT
ATCCTTTTAG TTTTAGCAAC TACAGTACCT ATTATGAAAT CTAAGGTGAA ACATTAA
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| Protein sequence | MKKKLPKEAY GGVSGKDYVP YFTGKSKNGV NLPVLIIGIV LAIVFAASTA YSGMKSGLTV
AAGIPGAIIG SVFVGIFARS KGILGKNITQ GMASGGESIA SGMIFVLPAI ILIGSKFTFL
EGVAAGVGGV LFGIGCLSLV YNYLIVEEHG KLMYPESMAI SETLVASEGS EDSIKFMGIG
FVISGIINVL TGSFLNLINN TVTYLGSKFY KWKFSTEVNP LLLGIGFIVG LEVSLTMFAG
SILANFGIAP LIGYFSDMAE KSMHSWNDAS MLIHQMDVNA ISGSYVKYIG AGMMLCGGII
GAIKLIPTII VSIKETLKAS PVNEENAEKN SGSIIILLVG ALLAFVIGFF ISNSIAMAIT
GAVVSIILSL LFVIVAGRLT GTIGTSNLPV SGMTIASLVI LTLVFVIMGW TGKADNKALL
LFATFMVVSI SVAGGYSQSQ KVTYIIGGSK KEMQNSFMIA SIVGVVVVTG TILVLSSQLS
ITGADAPFAL PQANLMSTLT SGIMEGNLPW PMIIVGVVMA LFLYLVDLPI MTVAIGFYLP
ISTTSIILVG ALIRVFIEKM SKSEHEKEVK VSNGISLSSG LVAGGSIVGL IGIVLQVTGI
ITPGTPTGFV ASNGMAIIVL ILLVLATTVP IMKSKVKH
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