| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1274 |
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| Symbol | |
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| ID | 4205503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1435327 |
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| End bp | 1436697 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565830 |
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| Product | Na+ driven multidrug efflux protein |
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| Protein accession | YP_698596 |
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| Protein GI | 110802626 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.605029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATC AATATGAACT AAAGAATGAA AAAATAGGGA GATTAATTTT AAAATATTCA
GCCCCAGCTA TACTATCTAT GATGGTAACT TCCTTATATA ACACTGTTGA TAGAGCTTTT
ATAGGATCTA TTAAGGATAT AGGAGCCCTT GCCATATCTG GCTTAGGAGT AACTATGCCC
TTGTTTACAA TATTAGGTGC TTTCTGTGTT GCCATCTCTG TAGGAGGAAG TACTAATATA
TCAATAAAGC TAGGGGAAGA AAAGAAGGAA GAAGCTGAAA GAATATTAGG AAATACCTTT
ATATTATCCA TAGTTGTTGC TTTAATTATT ATGATCTTTG GACTCTCCTT TTTAGAAAAA
ATACTATATT TTTTTGGAGC AAGTAAGGAA ACTATTATAT ATGCAAAGGA TTATATGAGG
GTAATACTTA TAGGGGCATG GTTTAACTTT CCTGGATTTG CTCTTAATAA TGCAATAAGA
GCTGAGGGAA ATCCAAAGTT AGCTGGTAAA ATCATGATAA TAAGCTGTAT TTTAAACATA
ATTTTAGATC CAATATTTAT ATTCTTATTT AATATGGGAA TTAAGGGAGC TGCCTTAGGA
ACTATAATCT GTCAATTTGT AGTTTTTCTT TGGACAATGT ATTATTTTAC CTTAGGAAAG
TCAAACCTAA AGCTAAGGAT TAAAGGAAGG ATATTAAATA AGAATATTTT AAGGGCAATA
ATCTTAATTG CTTTAACTCC GTTTTTTATG GAGCTTGCAG CAGGATTTAT ACATTTAATA
ACAAATAGAG TGCTTAAGGA TTATGGTGGA GATTTAGCAA TAGGAGCAAT GACATCCATA
ACATCTATAT ATCTTTTGTT TTTGATGCCA GTCTTTGGAC TAAGTCAAGG AATGCAGACC
ATAGTTGCAT ATAATTATGG AGCGAAGGAG TATAAACGTG CTAAAAAAAC TTTATTAATG
ACTATAATAA TTGCAACTTT AATTTTAACC TTAGGACTTG TACTTATTAG AATTTATCCA
AGAGAGTTTA TCAATATATT TACAAAGGAT AAGGAGTTAA TAAGTATAGC ACTTAATGGG
TTAAAAATAT ATACCTTTGC CTTACCTACC TTAGGGGTTT CAATTTTAGG GGCAGTATAT
TTTCAGTCTA TAGGAAATGT TAAAAAGTCA ATTTTTTTAA GTTTATTAAG ACAAGTTATA
CTATTTATAC CTATTGTATT TATAATACCT AGAGTATATG GACTAAATGG AGTGTGGATT
TCACAACCCT TAGCTGATAT TTTAGCTACC ATATTAATAC TTATATTTTT AATAAAAGAA
TTTTACATAA GAGATAAAAG TTATGCAATT CCCATAGAAG AAAGTGCATA G
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| Protein sequence | MKNQYELKNE KIGRLILKYS APAILSMMVT SLYNTVDRAF IGSIKDIGAL AISGLGVTMP
LFTILGAFCV AISVGGSTNI SIKLGEEKKE EAERILGNTF ILSIVVALII MIFGLSFLEK
ILYFFGASKE TIIYAKDYMR VILIGAWFNF PGFALNNAIR AEGNPKLAGK IMIISCILNI
ILDPIFIFLF NMGIKGAALG TIICQFVVFL WTMYYFTLGK SNLKLRIKGR ILNKNILRAI
ILIALTPFFM ELAAGFIHLI TNRVLKDYGG DLAIGAMTSI TSIYLLFLMP VFGLSQGMQT
IVAYNYGAKE YKRAKKTLLM TIIIATLILT LGLVLIRIYP REFINIFTKD KELISIALNG
LKIYTFALPT LGVSILGAVY FQSIGNVKKS IFLSLLRQVI LFIPIVFIIP RVYGLNGVWI
SQPLADILAT ILILIFLIKE FYIRDKSYAI PIEESA
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