Gene CPR_1270 details

Gene Information

• Locus tag: CPR_1270
• Symbol: greA
• ID: 4204619
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1430242
• End bp: 1430706
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642565826
• Product: transcription elongation factor GreA
• Protein accession: YP_698592
• Protein GI: 110802369
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAATT ATTTGACAGA GGAAAACGTT AGAAAGTTAA GAGAAGAGTT AGACTATAGA 
ATGTCTGTTG TTAGAGCAAA GATTGCGAAA GAGAAACTTG AGGCGGCAGC CCATGGGGAT 
AGATCAGAAA ACGCTGAGTA TAAGGAAGCT TGTAGAAACT ATAGAGAAAA TGATAATAGA 
ATACAATACC TTTTAACTAT GATTTCAACA GCAATAATAG TTGATGAAGA AAGTAATGAT 
AAATCTACAC TAGGTCTTAA CAGCAAAGCT AGAATAAAAT TTGTTGAAGA TGATGATGAG 
GATGTTGTTA CTTTAGTTAC AACTATGGAT TTAGATTTAG AAAACATGTG TATAAGCATA 
GAATCAGATT TAGGAAAGGC CCTAATGGGT AAAAAGGTTG GAGATGTAGT AGAAGTTGAA 
GCTCCTGGTG GAAACTATAC TGTAGAAGTA TTAGAAATAT TATAA 

 

Protein sequence

MNNYLTEENV RKLREELDYR MSVVRAKIAK EKLEAAAHGD RSENAEYKEA CRNYRENDNR 
IQYLLTMIST AIIVDEESND KSTLGLNSKA RIKFVEDDDE DVVTLVTTMD LDLENMCISI 
ESDLGKALMG KKVGDVVEVE APGGNYTVEV LEIL