Gene CPR_1240 details

Gene Information

• Locus tag: CPR_1240
• Symbol: cbiD
• ID: 4206410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1391941
• End bp: 1393038
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642565796
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_698562
• Protein GI: 110803536
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.178409
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGATA TGTATATAGA AAGCGGTGGA AAGAAACTTA GATGTGGATA CACTACAGGG 
TCTTGTGCAG CAGCAGCTGC TAAAGCCGCC ACTTATATGC TTTTTAATAA AAAAGACATA 
AGTGTTATAG AAATAGATAC TCCTAAAAAT ATAAAACTTA ATTTAGAAAT ACAAGATATA 
CAGGTCGAAA AAAATTCAAT CTCTTGCTCC ATAGTAAAAG ATGGGGGAGA TGACATAGAT 
GCTACCTCAG GTCTTGAAAT CTTTGCAAAG GCAGAAGAAA TTGAAGAAGG CTTTGAACTA 
TGTGGAGGAG AAGGCGTTGG AGTAGTAACT AAAGAGGGGC TTTTTGTAGA AAAAGGACAA 
CCTGCTATAA ATCCAGTACC TAGAGAAATG ATAAAAAAAG AAGTCTTAAG TGTTCTTCCT 
AAGGATAAGG GAGTTAGAAT AACAATTTTC GTTCCAAGAG GAAGAGAGAT TGCTAAGAAA 
ACATTTAACC CTAGATTAGG TATAGTTAAT GGAATATCAA TACTTGGTAC TACTGGAATA 
GTTTATCCAA TGTCAGAAGA GGCCTTAAAA GAATCTATTA GGATTGAAAT AAGGCAAAAA 
TCAGTAAATA ATAAAGACCT TGTATTTGTA TTTGGAAATA TGGGAGAAAG ATTTTTAAGA 
GAAAGAGGAT ACAAAAAAGA CAATATAGTT GTTATATCTA ATTATGTAGG TTTTTCTATA 
GAGTGTGCCT TAGCTCAAGG AATAAAGGAT TTAACCATAG TAGGCCATAT AGGAAAGTTA 
AGCAAGATTG CCTTTGGATG TTTCAATACA CATAGTAGGG TTTCAGATGT TAGATTAGAA 
GTTATAGCCC TAGAGCTTAC ATTAATGGGA TATGATTTAG AACTGGTACA AAAAGTTTTA 
GATCAAAAAA CAAGTGAAGG TGCCGTAAGA CTTCTTGGAG ATGATTTTCC TATGTTATAT 
GAAAGAATTG GAGAAAAGGT ATTAAAGAGA TTAGATATAT ATGCTTATGG TGAAGCAAAC 
TTTAATATTC TTATGTATTA TGGATCAAAG GAAATGAAGT TACTATATGA ATCTAAAAAT 
TCAAACTTGT TTGATTAA 

 

Protein sequence

MFDMYIESGG KKLRCGYTTG SCAAAAAKAA TYMLFNKKDI SVIEIDTPKN IKLNLEIQDI 
QVEKNSISCS IVKDGGDDID ATSGLEIFAK AEEIEEGFEL CGGEGVGVVT KEGLFVEKGQ 
PAINPVPREM IKKEVLSVLP KDKGVRITIF VPRGREIAKK TFNPRLGIVN GISILGTTGI 
VYPMSEEALK ESIRIEIRQK SVNNKDLVFV FGNMGERFLR ERGYKKDNIV VISNYVGFSI 
ECALAQGIKD LTIVGHIGKL SKIAFGCFNT HSRVSDVRLE VIALELTLMG YDLELVQKVL 
DQKTSEGAVR LLGDDFPMLY ERIGEKVLKR LDIYAYGEAN FNILMYYGSK EMKLLYESKN 
SNLFD