Gene CPR_1239 details

Gene Information

• Locus tag: CPR_1239
• Symbol: cbiE
• ID: 4205938
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1391302
• End bp: 1391913
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642565795
• Product: precorrin-6y C5,15-methyltransferase (decarboxylating)
• Protein accession: YP_698561
• Protein GI: 110803959
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2241] Precorrin-6B methylase 1
• TIGRFAM ID: [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.112336
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTTAAAA TATTAGGATT AGGACCAGGC CATGAAGACT ATATAATTCC TAAAGTTATT 
AAGGAACTAG AAAAAAGTGA TTATATAGTT GGTTTTGAAA GAGCAATTTC TAGCTTAAAG 
TTTTTAAATA GTATAAATGA TGAAAGATTT AAGAGAGTAA AAGGTTTAAA AGAAATAATA 
GAATTTCTAA ATGAAAATAA GGAAAAGAGG ATTTCAATAG TTGCCTCAGG AGATCCAACC 
TTTTATGGAA TTACAAATTA TATATGTAAG AATTATGAGG GAGAAGTTTC TATTGTTCCT 
GGAATAAGTT CTTTTCAATA TTTAACATGC AGAGTTAATA AGACTTGGAA TGATGCTTTT 
GTTGGAAGTA TGCATGGAAG AGAAGAAAAC TTTATAGAAG TTGTGAAGGA AAACAAACTT 
TCTATTTGGT TAACAGATAA AAAAAATACT CCTTCTGAGC TAAGTAAAAG GTTAATAGAA 
AATTCTATAG AATGTACTAT ATATGTTGGA GAAAATCTTT CTTATGAAGA TGAAAATATA 
ACAATTGGAA ACCCAAGAGA AATTTGCGAA AAGGATTATG GGGATTTATC TGTAATAATA 
ATTGAAAGAT AA 

 

Protein sequence

MVKILGLGPG HEDYIIPKVI KELEKSDYIV GFERAISSLK FLNSINDERF KRVKGLKEII 
EFLNENKEKR ISIVASGDPT FYGITNYICK NYEGEVSIVP GISSFQYLTC RVNKTWNDAF 
VGSMHGREEN FIEVVKENKL SIWLTDKKNT PSELSKRLIE NSIECTIYVG ENLSYEDENI 
TIGNPREICE KDYGDLSVII IER