Gene CPR_1238 details

Gene Information

• Locus tag: CPR_1238
• Symbol: cbiT
• ID: 4205008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1390689
• End bp: 1391282
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 642565794
• Product: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit
• Protein accession: YP_698560
• Protein GI: 110803257
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2242] Precorrin-6B methylase 2
• TIGRFAM ID: [TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.17061
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTA TAAAAGATTC AGAGTTTATA AGAGGAAAAT GTCCTATGAC AAAAGAGGAT 
ATTAGAATCC TTACTATTAG TAAATTAGAT TTAGATAAAG ATTCTAATTT TTTAGATATA 
GGAAGTGGAA CTGGTAGTAT TACTATTCAA GCTTCTAAAT TTATAGAAGA GGGAGCTGTA 
TTTTCTATAG AAAGAGATGA AGAAGCCATA AGAGTAACTA AGGAGAACTT AAAAAAATTT 
AATTGTAATA ATGTTACTCT TTTAGAGGGT GATGCTATAG AACATATGGA ATCACTTTCA 
AAGGAAATTA AAAAAGAAAA AATCTCAAAA TTTGATTCTA TATTTATAGG AGGCTCTGGT 
GGAGGCCTTG AAAAAATTAT AAATATATCA GATGAAATCT TAAAAGAGCA TGGAGTTTTA 
GTATTAAACT TTATAACTTT AAACAATGCA TATAATGCAA TAGAATTTTT AAAGAAATTA 
GAATATAAAA CAGAAATTTC TTTAGTTAAC ATAAGTAAAA ATAGAGAAAA TACATACATG 
ATGATTAGCA ATAATCCAAT TTTTATTGTT AAGGCATTTA AGGAGGAAAA TTAA 

 

Protein sequence

MKFIKDSEFI RGKCPMTKED IRILTISKLD LDKDSNFLDI GSGTGSITIQ ASKFIEEGAV 
FSIERDEEAI RVTKENLKKF NCNNVTLLEG DAIEHMESLS KEIKKEKISK FDSIFIGGSG 
GGLEKIINIS DEILKEHGVL VLNFITLNNA YNAIEFLKKL EYKTEISLVN ISKNRENTYM 
MISNNPIFIV KAFKEEN