Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1208 |
Symbol | |
ID | 4206066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1354694 |
End bp | 1355596 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 18% |
IMG OID | 642565764 |
Product | hypothetical protein |
Protein accession | YP_698530 |
Protein GI | 110803855 |
COG category | [S] Function unknown |
COG ID | [COG4866] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000509296 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA AAATTACCTT AAAAGATAAA TCTATTTACT ACAAATATAT AGATAAAAAC AAATTTTTAA GTTGTGAATA TTCTTTTACT ACACTTTTTA TGTGGAAAGA CTTTAATAAT ATAGAATATG ATATAGTAAA TAATATTTTT ATTATTAGAA AATATGACAA AATTAACGGT AAAATTTTCA TGCAACCTTT AGGAGATATA GATGATGATT CTTTAATAAA TATTATTGAT TATTTAGAAT TTATAAGAAA AAAAGAAAAT AATAAATGGT TATTTGGAGA TGTAAGCATA AATTTTCTTA ATAGATTAAA AGATATTTAT AAAGAAAATT TAATTTTTGA TGAAGAAAAA TTAAATTTTG ATTATTTATA TGACTTTGAT GATTTAAAAA ATTTATCAGG AAGAAAATTT AGAAATAAAA GAAATAAATA TAATCAGTTT ATTAAAAATT ATAATTATAA AACATCATTT TTTAAATGTT TTTTAAATAA TAAAGAAAAG GAAGAATGCT TAGAATTTTT AAATAAATGG TATTTAGAAA ATAAAGAAAT AGATGAGGAG TTTTTAGCTG AAATAAATGG AACAAGAAAT TTAATAAATT ATTTAGACCA ATTAGATTTA GATTTAATAA AACTTTATGT AGACAATCAA TTAATAGGAA TTTCCATAGG AGAGAGATTT AATGATATCA CATATATAGT TCATGTAGAG AAGTGTTTAA AAGAATTCAA AGGATCCTAT GCTTTTATAA ATAATGAATT ATTAAAAAAT TCTTTTTTAG ATCTAAAGTA TGTTAATAGA GAAGAGGATT TAGGCATATT AGGATTAAAA AAGTCAAAAA TGTCTTATAA TCCAAAGTTT TTTGAAAGAA AATATTTAGT TAAAATAAAG TGA
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Protein sequence | MFKKITLKDK SIYYKYIDKN KFLSCEYSFT TLFMWKDFNN IEYDIVNNIF IIRKYDKING KIFMQPLGDI DDDSLINIID YLEFIRKKEN NKWLFGDVSI NFLNRLKDIY KENLIFDEEK LNFDYLYDFD DLKNLSGRKF RNKRNKYNQF IKNYNYKTSF FKCFLNNKEK EECLEFLNKW YLENKEIDEE FLAEINGTRN LINYLDQLDL DLIKLYVDNQ LIGISIGERF NDITYIVHVE KCLKEFKGSY AFINNELLKN SFLDLKYVNR EEDLGILGLK KSKMSYNPKF FERKYLVKIK
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