| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1206 |
|---|
| Symbol | |
|---|
| ID | 4205544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1352562 |
|---|
| End bp | 1353917 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642565762 |
|---|
| Product | Mur ligase family protein |
|---|
| Protein accession | YP_698528 |
|---|
| Protein GI | 110802974 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0554717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAAAA TAGCTATTAA ATCTTATCTA AGCATAATCT TATCTAAAAT GACACAATTT
ATTTCAAAGA AAGTTTTTAA AGGTGGAACT AACTTTCCAG GTAAAGTAGC TTTAAAAATC
GATAGAAACA TTTTAAAAGT AGTTTCTAAA AATTATAAAG TTATTTTAGT TACTGGAACT
AACGGAAAGA CTACTACTAC TTCAATGATA TATAATGTCC TTAAAGGTAA TGGATTAGAT
GTTATAACTA ATGCTACTGG AGCAAACCTT TATCCAGGAA TAGTTAGTAC TTTCGTAGCT
AATTACAAAT TCTCTTCAAA TAAAGAAAGA TATGCAGTAA TTGAAGTTGA TGAAGCTAAC
TTAAAATTTA TAACAGAGTA TATAACTCCA GAAATAATAA CTGTAACTAA TCTTTTTAGA
GATCAGTTAG ATAGATATGG AGAGGTTTAT ACTACTCTAA ATAAAATATT AGAAGGAGTT
GTTAAAGTAC CAAGTACTAC TCTTCTTTTA AATGGAGATG AATCTTTATT AGGAAGACTT
GATGTTAAAA ATCCTAAAGT TTATTATGGA TTCGAAGTGT CTCCAAATAA AAACAAGAAT
ATAGAAATTA ATGCTGATGC TAAGTTCTGT AAGTTCTGTA AAGAGCCTTA TTCTTATAAC
TTTATAACAT ATAATCATCT TGGAAGTTTC TACTGTCCTA ACTGTGGATT CAAAAGAGAA
GATTTAAAAT ATAAAGTAGA AGAAATAGTA GAACTTACCC CTGAAAGTTC TAAGGTTGTT
ATAAATGGTG GTTTATTTAC AATAACTCAA CCTGGTACTT ATAACATATA CAACGGATTA
TGTGCTTATT CTGTTGCAAA AGAATTACAT ATTAATGATG AAGTTATTCA GAAATCATTC
TCTAATCAAA GTTCATCTTT TGGAAGACAG GAAACAATAA AAATTGGAGA TAAGGAAGCT
AGAATTATCT TGGTTAAAAA TCCAGCTGGA TACAATCAAG CCTTAGATAC TCTTCTTCTA
AATTCAGAAA GCTTTGCTGC AGCATTCTTA TTAAATGATA ATTATGCAGA TGGTAAGGAT
GTTTCTTGGA TCTGGGATGT TGATTTTGAA AAATTAAATT CAATGGACTT AAATGAAATA
TTTATCTCTG GAATGAGAGC TTATGATATG GCTGTAAGAT TGAAAATTGC TAATCTACCA
GTTGAAAAGT TTTTAATAAA GGAAGATTTT GAAGGCTTAA CAGAGGCAAT CAAAAATTCT
AATGAAAACA AGGTTTATAT CCTTGCAACT TATACTGCTA TGATTAACTA TAGAAAATAC
TTACATTCCA AAGGTTATAT TGATAAGCTT TGGTAG
|
|---|
| Protein sequence | MFKIAIKSYL SIILSKMTQF ISKKVFKGGT NFPGKVALKI DRNILKVVSK NYKVILVTGT
NGKTTTTSMI YNVLKGNGLD VITNATGANL YPGIVSTFVA NYKFSSNKER YAVIEVDEAN
LKFITEYITP EIITVTNLFR DQLDRYGEVY TTLNKILEGV VKVPSTTLLL NGDESLLGRL
DVKNPKVYYG FEVSPNKNKN IEINADAKFC KFCKEPYSYN FITYNHLGSF YCPNCGFKRE
DLKYKVEEIV ELTPESSKVV INGGLFTITQ PGTYNIYNGL CAYSVAKELH INDEVIQKSF
SNQSSSFGRQ ETIKIGDKEA RIILVKNPAG YNQALDTLLL NSESFAAAFL LNDNYADGKD
VSWIWDVDFE KLNSMDLNEI FISGMRAYDM AVRLKIANLP VEKFLIKEDF EGLTEAIKNS
NENKVYILAT YTAMINYRKY LHSKGYIDKL W
|
|---|
| |