Gene CPR_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1205 
SymbolmanA 
ID4206263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1351334 
End bp1352311 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content31% 
IMG OID642565761 
Productmannose-6-phosphate isomerase, class I 
Protein accessionYP_698527 
Protein GI110803662 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.140202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCAA TAAGATTTGA AAACTTATAC TATGATAAAG TTTGGGGTGG AAGAGATTTC 
GAACTTTTCA GAGACAATAT GCCAGAGGGA ATGATAGGAG AAACCTGGGA TGTTGCTTGT
CATAAAAATG GAATGAGTAT AGTTGAAAAT GGTGAATATA AAGGATTAAG ATTTGATGAG
TTAATAGATA AATTAGGAAG TGACTTAGTA GGTACTGAAA TATCAAAAGA GAAATTTCCT
CTACTTATAA AATTAATAAA CGCTAAGGAT AAATTATCAG TTCAAGTTCA TCCAAATGAT
GAATATGGTA TGAGAGTTGA AGGAGAGCTT GGAAAAACTG AAATCTGGTA TGTTGTTGAA
GCTTTTGAAG GAGCCAATTT AATAGTAGGA ACAAAGGATT GTACTAAAGA ACAATTTGTT
AAAGCTATAG AAACTGGTGA ATTTGATCAG TATTTAAATA GAGTGGAGGT AAAAAAAGGG
GATACTTTCT TTGTAAGAAG TGGACTAGTT CATGCTATAT GCGAAGGTGT TATAATAGCT
GAAATCCAAC AAAATAGTGA TACAACTTAT AGAGTATATG ACTATAACAG AGGAAGAGAA
ATCCATGTTG AAAAAGCTTT AGATTGTATC GATTTCTCAT TAAAAGGAGA AAAAGCTAAG
GGATTAAAAG TTTCATATGA TGAATATGAT AAAACTTATC TTTCACTATG TGAATATTTC
TCATTAGAAA AATATGACAT ACATGGAGTA TGTGAAGAAG AGAGTGATAA AGAAAGATTC
TTCATATTTA CATGTGTTGA AGGAGAAGGA ATCATAACTT CAGAAGAAGG CGAATTAGCA
ATTAAAAAAG GAGATAGTAT ATTCATACCT GCATCTTTAG GAAAATATTC TTTAAAAGGA
AACATGACAT TATTAAAGAG TTATGTTCCA AAAGAAGGTG CTGTTGAAGA GGAAATACTT
TCAGTAGTAA AAGCTTAA
 
Protein sequence
MYPIRFENLY YDKVWGGRDF ELFRDNMPEG MIGETWDVAC HKNGMSIVEN GEYKGLRFDE 
LIDKLGSDLV GTEISKEKFP LLIKLINAKD KLSVQVHPND EYGMRVEGEL GKTEIWYVVE
AFEGANLIVG TKDCTKEQFV KAIETGEFDQ YLNRVEVKKG DTFFVRSGLV HAICEGVIIA
EIQQNSDTTY RVYDYNRGRE IHVEKALDCI DFSLKGEKAK GLKVSYDEYD KTYLSLCEYF
SLEKYDIHGV CEEESDKERF FIFTCVEGEG IITSEEGELA IKKGDSIFIP ASLGKYSLKG
NMTLLKSYVP KEGAVEEEIL SVVKA