Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1201 |
Symbol | pyrB |
ID | 4205758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1346528 |
End bp | 1347451 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565757 |
Product | aspartate carbamoyltransferase catalytic subunit |
Protein accession | YP_698523 |
Protein GI | 110802599 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0733416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAA ACAAACACTT ATTAGATCCA TCAGATTTCA CAATAGAGGA ATTTGATGAA ATTTTCAAAT TAGCACATCA AATTATGACA AATCCAAAAG AATATCAAAA CATATGCAAT GGTAAAATTC TAGCAACACT TTTCTATGAG CCAAGCACTA GAACAAGATT GTCTTTTGAG TCAGCAATGA TTAGACTAGG TGGACAAGTT ATAGGTTTCT CAGAACCAAA TTCTTCATCA GTTTCTAAAG GAGAATCTTT AAGAGATACT ATTAAAACAG TAAACTGCTA TGCAGATCTT ATAGCAATGA GACATCCTTT AGAAGGCTCA GCAAAAGTTG CTTCAATGTA TTCAGATATC CCAGTTATAA ATGCAGGAGA TGGAGGTCAT CAACATCCAA CTCAAACATT AACAGATCTT CTTACAATAA AAGAATATAA AGGAAACCTA GAAGGAAATA CAATTGCATT ATGTGGAGAC TTAAAATTCG GTAGAACAGT GCATTCTCTT ATAAAAGCAC TTTCAAGATA TAAAAATAAT AAATTCATCT TAATATCTCC AATAGAACTT AGAATCCCCA ATTATATTAG AGAGCAAATT TTAGAAAAAA ATAATATAGA ATACAAAGAA ATTACTAGCC TAGAAGAAGG AATTAAGGAA GCTGACATTT TATACATGAC AAGAATACAA AGAGAAAGAT TTGTAGATCA AAGTGAGTAT GAAAGATTAA AAGATGTATA TGTATTAGAT GAAGCAAAAA TGAAGGGTGC CAAAGAAGAT ATGATGGTTC TTCATCCTCT TCCAAGAGTA AATGAAATAG CCTATGAAGT AGATGAAGAT TCAAGAGCAT TTTACTTTAA GCAAGCCAAA TGCGGAATGT ATGTAAGAAT GGCCTTAATG GCAAAACTTT TAGGGGAGGC GTAA
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Protein sequence | MLKNKHLLDP SDFTIEEFDE IFKLAHQIMT NPKEYQNICN GKILATLFYE PSTRTRLSFE SAMIRLGGQV IGFSEPNSSS VSKGESLRDT IKTVNCYADL IAMRHPLEGS AKVASMYSDI PVINAGDGGH QHPTQTLTDL LTIKEYKGNL EGNTIALCGD LKFGRTVHSL IKALSRYKNN KFILISPIEL RIPNYIREQI LEKNNIEYKE ITSLEEGIKE ADILYMTRIQ RERFVDQSEY ERLKDVYVLD EAKMKGAKED MMVLHPLPRV NEIAYEVDED SRAFYFKQAK CGMYVRMALM AKLLGEA
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