| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1199 |
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| Symbol | pyrF |
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| ID | 4204771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1344271 |
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| End bp | 1345134 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565755 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_698521 |
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| Protein GI | 110802482 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0530325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGCTG ATAAATTATT TGAAAAAGTA GAAAAAAACG GAGTAGTTTG TGTTGGACTA
GATACAAGCT TAGATTATAT ACCAGAGGAG TTTAAAAGTA AGTTTTCAAA TGAAAGCGAT
ATGTTATTTG CCTTCAATAA AGAAATAATA GATGCCACAC TAGATGTATC TGCATGTTTT
AAAGTTCAAA TAGCTTATTA CGAAGCCCTA GGTCTTAAAG GATTAGAAGC TTATAAAAAT
ACCTTAAGTT ATTTAAGAGA AAAGAATGCT TTAATCATAG CTGATATAAA AAGAGGGGAT
ATAGCTGCAA CGGCTAAAAT GTACGCAAAG GCTCACTTTG AAGGGGATTT TGAAAGTGAT
TTTATAACTC TAAATCCATA TATGGGAATG GATAGCATAG ATCCATACTT ACCTTATATA
GAAAAGAATG AAAAAGGAGT ATTTGTACTA GTAAGAACTT CAAATAAAGG AGCTCAGGAT
ATAGAGTATC TAGAGGCTGG AGATGGAAAG AAAGTTTATG ATGTAGTTGG AGAAAAGTTA
AATACTCTAG GAAAAAACTA TTTAGGAAAA CATGGTTATA GTTCAATAGG TGGAGTTGTA
GGTTGTACTC ATCAAGAAGA AGCAAAAGAA ATGAGAGATA AATTAGATAC AATGCCATTT
TTAATACCTG GATATGGTGC ACAGGGAGGA ACTGCTAAAG ATGTGGCATC TTATCTTAAA
AATGGAAATG GTGGAATTGT AAACTCTTCA AGAAAGATAC TATTAGCCTA TAAAGCTATG
GAAGATAATA AAAACTTTGC AGAATGCGCT AGAAAAGAAG CCATTTCAAT GAGAGACAGT
ATAAGAGAAG CAATTTTAAA ATAG
|
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| Protein sequence | MIADKLFEKV EKNGVVCVGL DTSLDYIPEE FKSKFSNESD MLFAFNKEII DATLDVSACF
KVQIAYYEAL GLKGLEAYKN TLSYLREKNA LIIADIKRGD IAATAKMYAK AHFEGDFESD
FITLNPYMGM DSIDPYLPYI EKNEKGVFVL VRTSNKGAQD IEYLEAGDGK KVYDVVGEKL
NTLGKNYLGK HGYSSIGGVV GCTHQEEAKE MRDKLDTMPF LIPGYGAQGG TAKDVASYLK
NGNGGIVNSS RKILLAYKAM EDNKNFAECA RKEAISMRDS IREAILK
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