Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1196 |
Symbol | pyrE |
ID | 4204132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1341876 |
End bp | 1342454 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642565752 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_698518 |
Protein GI | 110801557 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase [TIGR01367] orotate phosphoribosyltransferase, Thermus family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.100317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA CAGACGCTAT GGTTATAGAT ACATTAAAAG AGGTTGGAGC ATTATTAGAA GGACATTTCT TATTATCATC AGGAAGACAC TCAAATAGAT ATTGCCAATG TGCTCAATTA TTAAAATACC CAGAAAAAGC TGAGAAAGTA TTAAAGGTTG TAGCTGATCA ATTAAAAGAT ATAGACTTTG ACTTAGTTGT AGGACCAGCT ATGGGAGGAG TTATAGTAGC TTACGAATTA GGAAGACAAT TAGGTAAACC TGCAATCTTT ACTGAAAGAG AAAATGGAGA AATGACTCTA AGAAGAGGAT TTACTATAGA AAAAGGACAA AAGGTAGTAA TAACAGAGGA TGTTGTAACT ACAGGTAAGA GCTTTAAGGA AGCTGCAAAG GTAATTGAAG AACAAGGGGG AGAAGTTGTT GCAGTAGTTT GTATAGTAGA TAGAACTCCA GGCAATGTAA CAGATTTCCC AATGTATAGT TCAATAAAGC TTGATATAGA AAGCTTTGAG GCAGAAAATT GCCCACTATG TAAAGAAGGA GTTCCTTACA TAAAGCCAGG AAGCAGAAAT ATAAAATAG
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Protein sequence | MKNTDAMVID TLKEVGALLE GHFLLSSGRH SNRYCQCAQL LKYPEKAEKV LKVVADQLKD IDFDLVVGPA MGGVIVAYEL GRQLGKPAIF TERENGEMTL RRGFTIEKGQ KVVITEDVVT TGKSFKEAAK VIEEQGGEVV AVVCIVDRTP GNVTDFPMYS SIKLDIESFE AENCPLCKEG VPYIKPGSRN IK
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