Gene CPR_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1190 
Symbol 
ID4205021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1338404 
End bp1338817 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content31% 
IMG OID642565746 
ProductISCpe7, transposase 
Protein accessionYP_698512 
Protein GI110801991 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0283879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGTTTA TAAGCGGTAA AAAATATTAT CTATGGCTTG TTATAGACTC TGAAACACGT 
TTTGTGTTAG CTTTTCATCT AACACAAGCA CGTGATTCTG ATGCAGCATT TATTCTTATG
AATCAAGCTA AATCTATGGG TAAACCTAAT AACTTTATCA CAGATAGACT ACCGTCCTAT
AATGAAGCAG TTAAAACCGT ATTAAACGAA AGCACTCATA TTCCTGTACC ACCTATGTCT
AGTGATACAA AGAATAACTT AATAGAGTCT TTCAATAAAA CATTTAAAGC ATGGTATAAA
ACTAAAAAAG GTTTTAATTC TTTTGAAAAA GCTAATAACT TAATATACAT GTTTATATTT
CACTATAATT TCATTAGACC TCATGGATCA TTAAACGGCT CTACGCCTGC CTAA
 
Protein sequence
MVFISGKKYY LWLVIDSETR FVLAFHLTQA RDSDAAFILM NQAKSMGKPN NFITDRLPSY 
NEAVKTVLNE STHIPVPPMS SDTKNNLIES FNKTFKAWYK TKKGFNSFEK ANNLIYMFIF
HYNFIRPHGS LNGSTPA