Gene CPR_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1185 
Symbol 
ID4205730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1335320 
End bp1335964 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content31% 
IMG OID642565741 
Producthypothetical protein 
Protein accessionYP_698507 
Protein GI110802772 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000512351 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AAAAATTTAT TCCTAAGCTT ATATTTTTCT TATTAGGAAT GGCAATCATA 
CAATTAGGTG TTGTAATATT CTTATTAAGC GGAGCTGGAT CAGATCCGTT TACTGTATTT 
ACTCAAGGAC TTTCAAAAGC TCTAAGCGTT TCAACTGGAA CTGCTAACAT GATAATACTT 
GTTACTTTAG TTATTGCAAT CTTCATTGCA GATAGAAAAC AACTTAAAGT TGGAACTTTT 
GTACTTGTTT TAGTGGTAGG CCCTACTATA GATGCAATTA TGGGAATATT ACATAGATTT 
GGATTAGATA CTTCACTTAG TAACTTTAAT TTATTTACAA AATGCGTAAT TGTAGCTGTA 
AGCTGTATTA TAATAGCTAT AGGATTCTCA TTCTTAGTTA GTACTGAATT AGGAGTTGCA 
CCAAACGATT TAGTTCCTCT TATAATAAGA GATAAAACTA ATTTCCAATA CCGTTGGATA 
CGTATCGGTT TAGATTTAAG TTTCCTAGTA GTTGGTTATT TACTAGCTGG TGTTGTAGGT 
CTTGGAACAA TAATAGCAGT ACTTTTCACA GGTCCAGCTA TACAATTTTT TATGCCACCA 
TGTGAAAAAA TTGTACATAA ATTTATAGGC AAAAATGCTG CTTAA
 
Protein sequence
MKKEKFIPKL IFFLLGMAII QLGVVIFLLS GAGSDPFTVF TQGLSKALSV STGTANMIIL 
VTLVIAIFIA DRKQLKVGTF VLVLVVGPTI DAIMGILHRF GLDTSLSNFN LFTKCVIVAV 
SCIIIAIGFS FLVSTELGVA PNDLVPLIIR DKTNFQYRWI RIGLDLSFLV VGYLLAGVVG 
LGTIIAVLFT GPAIQFFMPP CEKIVHKFIG KNAA