| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1174 |
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| Symbol | hfq |
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| ID | 4203967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1323771 |
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| End bp | 1324013 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565730 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_698496 |
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| Protein GI | 110801743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGT CAATCAATAA CCTACAAGAT ATATTCTTAA ACAATGCAAG AAAGGAAAGA
ATTCCTGTAA CAATATTTTT AGTAAATGGG GTTCAATTAA AGGGTATCGT TAAAGGGTTC
GATAGCTTTA CAGTAGTTTT AGATAGTGAT GGAAAGCAAC AATTAGTTTA TAAACATGCT
ATAAGCACAG TATCACCAGC TAAACCTATT TTATTTAATA GTGCGCAAGT TTTTGATAAT
TAA
|
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| Protein sequence | MNKSINNLQD IFLNNARKER IPVTIFLVNG VQLKGIVKGF DSFTVVLDSD GKQQLVYKHA
ISTVSPAKPI LFNSAQVFDN
|
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| |