| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1169 |
|---|
| Symbol | pfl |
|---|
| ID | 4206334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1314709 |
|---|
| End bp | 1316943 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642565725 |
|---|
| Product | formate acetyltransferase |
|---|
| Protein accession | YP_698491 |
|---|
| Protein GI | 110803366 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC AATGGGAAGG CTTTAAAGAA GGAGTATGGC AAAAGGGAAT AGATGTTAGA
AACTTCATAC AAAAGAACTA TACTGCATAT GAAGGAGACA AGAGTTTCTT AGAAGGAACA
ACAAAAAGAA CTGATGCAGT TTTAGAAAAA GCTCAAAAGT TAATTATAGA AGAAATAGAA
AAAGGCATTA TAGATGTTGC TACAGATAGA GTATCTGGAA TAGACAATTA TGAGCCTGGA
TATTTAGATA AAGATAACGA AGTTATCGTT GGTTTCCAAA CAGATGCACC ACTTAAAAGA
ATAGTTAATC CTTTCGGTGG AATGAGAATG GTTGAAAGTT CTTTAAAAGA ATACGGCTAT
GAATTAGATA GCAGTATAAG AGAACACTTT AACGCTTATA GAAAAACTCA TAACCAAGGT
GTATTCGATG CATACTCAGC TGAAACAAGA GCTGCAAGAT CTGCTGGTCT TTTAACTGGT
CTTCCAGATG CTTATGGTAG AGGAAGAATT ATAGGTGACT ATAGAAGAAT TGCCCTTTAC
GGTATAGATT ATCTAATAGA AGAAAAGAAA AAAGATTATG CTAATATATC ATTTGAAAGC
GAAGGCTCAG TAGAAGAATA TATTCAATTA AGAGAGAATG TTTCGGAGCA AATAAGAGCT
TTAGAAGCAA TAAAATCAAT GGCTGCAAGA TATGGTTTTG ATATATCTAA ACCAGCTGCA
AATGCTAAGG AAGCAGTTCA ATTCTTATAC TTTGGATACT TAGCTGCAGT TAAAGAAAAC
AATGGAGCAG CAATGTCTCT AGGAAGAACT TCTACTTTCT TAGATATTTT CATAGAAAGA
GATCTTAAGG CAGGAACTTT AACTGAGTTA GAAGCTCAAG AATTAATAGA TCAATTTATA
ATAAAATTAA GATTAGTTAG ACACTTAAGA ACTCCTGAGT ATAATGATTT ATTTGCTGGA
GACCCAACTT GGGTAACAGA AGGTATTGGT GGTATGGGTG TAAATGGTAA GCCATTAGTA
ACTAAAAACT CATTTAGATA TCTTCAAACT TTAATAAACT TAGGACCTGC TCCAGAACCA
AATATGACTG TTTTATGGTC AGATAGATTA CCAGAAGGAT TCAAAAAATT CTGTGCTGAG
GTATCAATTA AAACTGACTC AATTCAATAT GAAAATGATG AGTTAATGAG ACCTATATAC
GGAGATGATT ACTCAATAGC TTGCTGTGTA TCAGCAATGC AAATTGGTAA GCAAATGCAA
TTCTTCGGAG CTAGAACTAA CTTAGCTAAA GCTTTACTTT ACACTATAAA TGGTGGTATT
GATGAAAAAT CAGGTAAAGT TGTTATTAAA GGTTTAGAGC CAATAACAGA CGAGGTTTTA
GATTATGATA AATTAAGAGC TAACTATGAT AAAGTTTTAG AGTACGTTGC TAAGCTTTAT
GTAGATACAA TGAATGTTAT CCACTACATG CATGATAAAT ATGCTTATGA AGCTGGACAA
ATGGCTTTAC ATGATACTCA TGTAGGAAGA TTAATGGCAT TTGGTATAGC TGGTTTATCA
GTTGTAGCTG ACTCATTAAG CGCAGTTAAA TTCGCTAAAG TTAAACCTAT AAGAGAAAAT
GGAATAGCTG TAGACTTTGA AATAGAAGGT GACTTCCCTA AATACGGAAA TGATGATGAT
AGAGTTGACG ATTTAGCTGT AGAAATAGTT AGAAAGTTCT CAAGTGAGCT TAAGAAACAT
CCATTATATA GAGGTGCTAA GCACACATTA TCAATCTTAA CTATTACTTC AAACGTAGTT
TATGGTAAGA AAACAGGTTC AACTCCAGAT GGAAGAAAAG CTGGTGAAGC ATTTGCTCCA
GGAGCTAACC CAATGCATGG AAGAGATAAC AGTGGAGCTT TAGCTAGCTT AAACTCAGTT
GCTAAAATTC CATACTGTGA AGTTTGTGAA GATGGTGTAT CAAACACATT CTCAATCGTT
CCAGATGCTT TAGGAAAAGA AGAAGATTCT AGAATAGATA ACTTAGTTGC TATTATGGAT
GGTTACTTCA AACAAGGAGC TCACCATCTA AATGTTAATG TATTTAACAG AGAAACTTTA
ATGGACGCTA TGGAGCATCC TGAAAAGTAT CCAACATTAA CAATCAGAGT ATCAGGTTAT
GCTGTTAATT TCAATAGATT AACTAGAAAT CAACAATTAG AGGTTATAAG CAGAACATTC
CACGATTCTC TATAA
|
|---|
| Protein sequence | MFKQWEGFKE GVWQKGIDVR NFIQKNYTAY EGDKSFLEGT TKRTDAVLEK AQKLIIEEIE
KGIIDVATDR VSGIDNYEPG YLDKDNEVIV GFQTDAPLKR IVNPFGGMRM VESSLKEYGY
ELDSSIREHF NAYRKTHNQG VFDAYSAETR AARSAGLLTG LPDAYGRGRI IGDYRRIALY
GIDYLIEEKK KDYANISFES EGSVEEYIQL RENVSEQIRA LEAIKSMAAR YGFDISKPAA
NAKEAVQFLY FGYLAAVKEN NGAAMSLGRT STFLDIFIER DLKAGTLTEL EAQELIDQFI
IKLRLVRHLR TPEYNDLFAG DPTWVTEGIG GMGVNGKPLV TKNSFRYLQT LINLGPAPEP
NMTVLWSDRL PEGFKKFCAE VSIKTDSIQY ENDELMRPIY GDDYSIACCV SAMQIGKQMQ
FFGARTNLAK ALLYTINGGI DEKSGKVVIK GLEPITDEVL DYDKLRANYD KVLEYVAKLY
VDTMNVIHYM HDKYAYEAGQ MALHDTHVGR LMAFGIAGLS VVADSLSAVK FAKVKPIREN
GIAVDFEIEG DFPKYGNDDD RVDDLAVEIV RKFSSELKKH PLYRGAKHTL SILTITSNVV
YGKKTGSTPD GRKAGEAFAP GANPMHGRDN SGALASLNSV AKIPYCEVCE DGVSNTFSIV
PDALGKEEDS RIDNLVAIMD GYFKQGAHHL NVNVFNRETL MDAMEHPEKY PTLTIRVSGY
AVNFNRLTRN QQLEVISRTF HDSL
|
|---|
| |