Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1167 |
Symbol | |
ID | 4206611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1311834 |
End bp | 1312979 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565723 |
Product | malate oxidoreductase (NAD) (malic enzyme) |
Protein accession | YP_698489 |
Protein GI | 110801879 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.641999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGG ACGAATTATT AAAACAAAGA GAATTAGCTC ATGGATTAAT AAGTATAAAA CCTAATTTTG ATATAAATAA TAGAGAACAA TTATCACAAA TATATACTCC TGGAGTATCA ACTATTTGTA AAGAGGTTGA GCATCATCCT AGTATGCTGA AAACACTAAC TTCTGTTGGA AATTCAATAG CTGTTATAAC AGATGGTACT GCGGTTTTAG GTCTTGGGAA TATAGGTACC CTTGCAGGAT ATCCTATAGT AGAGGCTAAA GCTTTAGTTT ATAAAGATCT AGCTGGTGTA AACGCTATCC CATTATGCGT TGATCAAATA GGATGCAATG AATTAATTAA AACAATAAAA AATATATATT CAAGTTTTAG TGGAATTCAT CTTGAAGATA TAAAGGCACC GGAATGCTTT TATATAGAAG ATGAACTTAA AAAAACTTTA AATATTCCAG TTTATCATGA TGACCAACAT GGTACTGCCA TTGCTGTTTT AGGGGCTCTT TATAATGCAT CTAAGGTAGT TAATAAGGAT TTTTCAAAGT TAAAGGTATT AATTTTAGGG GCAGGAGCTT CAGGAATTGC AACAGCAAAA TTATTATTAA AGGCTGGAAT AGAAGATATT ATATTAGTTG ATAAGAATGG AGCTTTAGTT AGTGGTGATG AAACTCTTAA TGATCCTCAA AAAGAAATGG CTAAAATAAC AAATAAAGAA TTAAAAAAAG GAACTTTGGA AGAAGTAATT AAGGGAAGAG ATGTATTTAT AGGTTTATCA GAAGGGAATC TTGTAACTAA GGAAATGGTA GAAAGTATGA ATGAGGATCC TATAATATTC GCTTTAGCTA ATCCAACGCC AGAGATAAAA CCTGAAATTG CAAAGGAAGC TGGTGCAAGG GTTATTGCAA CAGGTGGACC TTCTTATCCA AATCAGATTA ATAATATATT GGTTTTCCCA GGACTATTTA AAGGATTATT AGAAGCTAAG GCAACTGATG TAACTTATGG TGTAATGATA GCAGTTAGTA AAAAATTAGC TTCCTTAGTT GAAAATCCAA CTGCTGAAAA AATAATACCT GGAGTATTTG ATGGTGATAT AGTTAAGTCT GTTTCTGAAA CTGTGGTAAA AAATATTGAG AAGTAG
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Protein sequence | MTKDELLKQR ELAHGLISIK PNFDINNREQ LSQIYTPGVS TICKEVEHHP SMLKTLTSVG NSIAVITDGT AVLGLGNIGT LAGYPIVEAK ALVYKDLAGV NAIPLCVDQI GCNELIKTIK NIYSSFSGIH LEDIKAPECF YIEDELKKTL NIPVYHDDQH GTAIAVLGAL YNASKVVNKD FSKLKVLILG AGASGIATAK LLLKAGIEDI ILVDKNGALV SGDETLNDPQ KEMAKITNKE LKKGTLEEVI KGRDVFIGLS EGNLVTKEMV ESMNEDPIIF ALANPTPEIK PEIAKEAGAR VIATGGPSYP NQINNILVFP GLFKGLLEAK ATDVTYGVMI AVSKKLASLV ENPTAEKIIP GVFDGDIVKS VSETVVKNIE K
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