Gene CPR_1166 details

Gene Information

• Locus tag: CPR_1166
• Symbol: citX
• ID: 4205219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1311281
• End bp: 1311793
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642565722
• Product: apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
• Protein accession: YP_698488
• Protein GI: 110801626
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG3697] Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase)
• TIGRFAM ID: [TIGR03124] holo-ACP synthase CitX

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.632968
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAA AGAATAAATT TTTGATGGAA ATATTAAAAG GTAGAGAAGA GAGAGCATTT 
GAAGTAAAAA AACTAAATGA AAGATTTCAG GGAACTATTA TATGTTTAAC ATTAAATATT 
CCTGGTCCAG ATAAATTAGA TGAACTTTAT TATTATGCAT TTAATGAAGC CACTAAGGCA 
TTGGAGGCTT CATTAAATAT ACATGTTTTA AAAGAAAGAG CTCCTCTTTC TGGATATGAA 
GCTTATTTTG TTTCAGATAA GGATATAAAA GAAATAAAAA AAATAGCTTT AACTTTAGAG 
GAAAAACATC CTTTAGGAAG GCTATTTGAT ATAGATATAT TCTATAAAGA CTTATCTAAA 
ATAAGCAGGG AAGATTTAGG AGAGCCTAAA AGAAAATGTT TTTTATGTGG AGAAGATGCA 
GTATCCTGTG GCAGAAATAG GAAACATTCA GTTTACGAAC TTATTTCAAG CATAAAAGAA 
AAAATACTTC AGTATAAAAA CAATAAAAAT TAA 

 

Protein sequence

MNEKNKFLME ILKGREERAF EVKKLNERFQ GTIICLTLNI PGPDKLDELY YYAFNEATKA 
LEASLNIHVL KERAPLSGYE AYFVSDKDIK EIKKIALTLE EKHPLGRLFD IDIFYKDLSK 
ISREDLGEPK RKCFLCGEDA VSCGRNRKHS VYELISSIKE KILQYKNNKN