| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1165 |
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| Symbol | citF |
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| ID | 4206414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1309703 |
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| End bp | 1311262 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642565721 |
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| Product | citrate lyase, alpha subunit |
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| Protein accession | YP_698487 |
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| Protein GI | 110803540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3051] Citrate lyase, alpha subunit |
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| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.776939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATCA ATAGTATCAA TATAAATATA CCAGATGACA TATTAAAAGA GAGAAAAACT
GTAGAATTTA AAGGAGAATT CTCATTAGAA CCTAAGGGGA ATATTCAAGG AAGAAAAATA
ACAGCAACTT TTTGTGGGAA AAATAAAAAG TTATCATCTA TAGCTGAATC TATAGAAAAA
ACAGGAGTTA AAGATGGTAT GACTATATCT TTTCATCATC ACTTCCGTGC TGGAGATTAT
ATCATTCGTA TGGTTATGAA GGAAATTGCT AATCTTGGAA TTAAGGATTT AAATCTTTGC
GTAAGTTCTT TAACAAGTGC TCATGAATTT TTAATAGATT ATATAAAAGA TGGCACAGTA
ACAGGAATAG AAACAAGTGG GATTCGTGGA AAACTAGGAG AAGAAATTTC AAAAGGAATA
ATGAAAAAAC CAGTAATTAT CCGTTCTCAT GGTGGACGTG CTCGTGCAAT TGAGGCTGGT
GATACAAAAA TAGATGTAGC CTTTTTAGGT GTTCCTTGTT CAGATGATTA TGGAAATGCT
AATGGAATAC ATGGAAAATC TCAATGTGGT TCTTTAGGAT ATGCTATTAT TGATTCTAAA
TATGCAGACA AGGTAGTTCT TATTACAGAT ACTATAATGC CATATCCTAA TGTACCAGCA
AGTATCTCTC AACAGGATGT AGATTACATT GTGGAAGTTG AAGAAATAGG TGATCCAAAT
GGTATTGCTT CAGGGGCTAC AAGATTTACA AAGGATCCTA AAGAGTTATT AATAGCAAAA
TATGCTTCCG CAGTAATTGA AGCTTCTGGA TATTTAAAAG ATGGTTTTTC AATTCAAGCA
GGTACAGGTG GAGCTTCATT AGCAGTAGCT CGTTTCCTAA AAGAGAAAAT GGAAGAAAAA
AATATAAAGG CAAGCTTTGG CCTTGGTGGA ATAAGTAAAC AATTTGTTGA TTTACATGAA
GAAGGATTTA TAGGAACATT ATTTGATGTT CAAGGATTTG ATTTAAAAGC TGTTGAATCT
ATTGGTAAAA ATAATAAACA TGTAGAAATA GATGCTTCGC TTTATGCAAA TCCACATAAT
AAAGGATGTA TTGCTAATAA ATTAGACATA GTAATATTAA GTGCTTTAGA AGTGGATAAA
AACTTCAACG TAAATGTTAT AACTGGTTCT GATGGTTATA TAAGAGGGGC ATCAGGTGGA
CACTCAGATA CGGCTGCTGG TGCTAAATTA TCAATGATAG TTTCTCCTTT AGTTCGTGGT
AGAATACCAA CAGTAGTTGA TAAGGTTAAT ACTGTAATAA CACCTGGTGA ATCAATAGAT
GTCATTGTAA CAGAACGTGG TGTTGCTATA AATGATAAGC TCTCTAAGAA TAAAGAGTTA
AAAGAAAGAT TAGAATCAAA TAAAAATATT CCTATATTAT CAATAGAAGA GCTCCATGAA
AAAGCTTTAA AAATTACAGG GACTCCAGAA CCTATAAAAT ATGAAGATAG AGTTGTTGGA
ATTATTGAAT ACCGTGATGG TTCAATAATA GATGTTATAC ACAAGGTTAA AGAGGATTAA
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| Protein sequence | MGINSININI PDDILKERKT VEFKGEFSLE PKGNIQGRKI TATFCGKNKK LSSIAESIEK
TGVKDGMTIS FHHHFRAGDY IIRMVMKEIA NLGIKDLNLC VSSLTSAHEF LIDYIKDGTV
TGIETSGIRG KLGEEISKGI MKKPVIIRSH GGRARAIEAG DTKIDVAFLG VPCSDDYGNA
NGIHGKSQCG SLGYAIIDSK YADKVVLITD TIMPYPNVPA SISQQDVDYI VEVEEIGDPN
GIASGATRFT KDPKELLIAK YASAVIEASG YLKDGFSIQA GTGGASLAVA RFLKEKMEEK
NIKASFGLGG ISKQFVDLHE EGFIGTLFDV QGFDLKAVES IGKNNKHVEI DASLYANPHN
KGCIANKLDI VILSALEVDK NFNVNVITGS DGYIRGASGG HSDTAAGAKL SMIVSPLVRG
RIPTVVDKVN TVITPGESID VIVTERGVAI NDKLSKNKEL KERLESNKNI PILSIEELHE
KALKITGTPE PIKYEDRVVG IIEYRDGSII DVIHKVKED
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