| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1156 |
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| Symbol | miaB |
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| ID | 4206388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1300515 |
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| End bp | 1301858 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565712 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_698478 |
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| Protein GI | 110803553 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.516492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATTAG AAAATAACAT GGATAAAAAA CTCTTCTGTA TTTCTACATA CGGATGCCAA
ATGAATGAAG AAGATTCAGA AAAATTATCA GGGATGTTAA AATCTCAAGG ATATGAAAGA
ACTGAAAATA AAGAAGAGGC TTCTATTATA ATCTTTAATA CATGTTGTGT AAGAGAAAAT
GCTGAAAATA AGGTTTTTGG TAATCTTGGA CAACTTAAGC AATTAAAAAA GAAAAATCCT
AACTTAGTAA TAGCGATTTG TGGATGTATG ATGCAACAAG TAGGTATGGC AGATAAAGTC
TTAAAAACTT TCCCTTATGT TGACATAATA TTTGGAACAC ATAATGCCCA TAAATTCCCT
GAATATCTAC ATAGAGTACT TCAAGAAGGT GTTCAAGTTA AGGAAATATT AAATAAAGAA
GAAGGAATTG TTGAAGGATT ACCTATAGAT AGAAAGAGTG ATGTTAAAGC ATTCGTTACT
ATCATGTATG GATGTAACAA TTTCTGTACA TACTGTATAG TTCCTTATGT TAGAGGAAGA
GAAAGAAGTA GAAAATCTGA GGATATCATA AAAGAAATAG AAGAATTAGT ATCTAAAGGA
TATAAAGAAA TAACTTTATT AGGACAAAAC GTAAACTCAT ACGGAAAAGG CTTAGAAGAA
GATATAGACT TTGCCGGTCT TTTAAGAAAA GTTAACGAAG TTAAGGGGTT AGAGAGAGTT
AGATTTATGA CTTCTCATCC TAAAGATTTA AGTGATGATG TTATCATGGC TATAAAAGAA
TGTGATAAGC TTTGTGAGCA AGTTCACTTA CCAGTTCAAA GTGGATCATC AAGAATATTA
AAAGAGATGA ATAGACACTA TGACAGAGAG TATTACTTAG ATTTAGTTAA GAAAATAAAA
TCAGAAATAC CAGATGTTAC TTTAACAACT GATATAATAA TTGGGTTCCC AGGAGAAACT
GAAGAGGATT TCTTAGATAC ATTAAGTCTT TGTGAAGAAG TTGGATATGA TTCAGCATTT
ACATTTATCT ATTCAAGAAG AAATCATACT CCTGCTGACA AAATGGAAAA TCAAATTCCA
GATGACATAA AGCATGATAG ATTCAATAGA TTAGTTGAAG CTATCAATAA AAAGGTTGTA
ATAAAAAATA AAGAATATGA AGGTAAGGTA GTTGAAGTTC TTGTTGAAGG ACCAAGTAAG
AATGATGAAA CTAAATTAAC TGGAAGAACT AGAAATGGTA AATTAGTTAA CTTTGCTGGT
GATGAAAAAC TAGTAGGTGA ATTAGTTAAC TTAAAAATAG TTAGAGCACA ACCATTCTCA
TTAATTGGTG AAATAGTAGA ATAA
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| Protein sequence | MTLENNMDKK LFCISTYGCQ MNEEDSEKLS GMLKSQGYER TENKEEASII IFNTCCVREN
AENKVFGNLG QLKQLKKKNP NLVIAICGCM MQQVGMADKV LKTFPYVDII FGTHNAHKFP
EYLHRVLQEG VQVKEILNKE EGIVEGLPID RKSDVKAFVT IMYGCNNFCT YCIVPYVRGR
ERSRKSEDII KEIEELVSKG YKEITLLGQN VNSYGKGLEE DIDFAGLLRK VNEVKGLERV
RFMTSHPKDL SDDVIMAIKE CDKLCEQVHL PVQSGSSRIL KEMNRHYDRE YYLDLVKKIK
SEIPDVTLTT DIIIGFPGET EEDFLDTLSL CEEVGYDSAF TFIYSRRNHT PADKMENQIP
DDIKHDRFNR LVEAINKKVV IKNKEYEGKV VEVLVEGPSK NDETKLTGRT RNGKLVNFAG
DEKLVGELVN LKIVRAQPFS LIGEIVE
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