| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1152 |
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| Symbol | ispH |
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| ID | 4205264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1296372 |
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| End bp | 1297220 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565708 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_698474 |
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| Protein GI | 110802077 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAGAA ACGTAATTTT AGCTAAGAAT GCTGGCTTTT GCTTTGGAGT AAAAAGAGCA
GTTGATGAAG CTATAAAATA TCAAAAAGAA TTTGGAAAAA AAATATATAC TTTAGGACCA
CTTATTCATA ACAATGATGT TGTTAATTAT TTAGAGGATA ATGATATATT TGCAATTGAA
CTTTCAGATA CGAATTCTTT AAATAAGGGG GATGTTGTAC TTATAAGATC CCACGGGGTT
AAAGAAAGTG TAATAAAAGA TTTAACAGAC AAGGGTTTAA TTGTTAAAAA TGCAACTTGT
CCATATGTAA CTAATATTCA GCTAAAGGTT AAAAAATGTT ATGAACAAGG ATATAAGATA
ATAATTGTTG GGGATGAAAA TCACCCAGAA GTTATTGGAA TTAATGGCTG GTGTAATGAT
TCTGCCATAA TAACAAATGG AAAAACAGAA CTTGAAAATA TTCCAGCAAA GGTTTGTGTA
GTTTCACAAA CTACTGAGAA AAAAGAAACT TGGAACAAGG TTTTAAATGA AATAGTAAAA
GAAAGTAAAG AAATAGTTGC TTTTAACACT ATTTGTTCAG CTACTGATGT TAGACAAAAA
AGTGTACAAG AGCTTTCAAA AGAGGCTGAT TTAGTTTTTG TTATAGGTGG AAAGAATAGT
TCTAACACAA CAAAACTATA TGAAATATGC AAAAAGGAAT GTCCTAAGAG CTATCATATA
GAAAATGTTA AAGAATTAGA TGAAAGTCTA TTAGAAGATG AAAGTGTTAA AACTATAGGA
ATCACTGCTG GGGCTTCGAC TCCAGACTGG ATAATAAATG AAGTTATTTC TAAGATTAAA
GAATTATAA
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| Protein sequence | MERNVILAKN AGFCFGVKRA VDEAIKYQKE FGKKIYTLGP LIHNNDVVNY LEDNDIFAIE
LSDTNSLNKG DVVLIRSHGV KESVIKDLTD KGLIVKNATC PYVTNIQLKV KKCYEQGYKI
IIVGDENHPE VIGINGWCND SAIITNGKTE LENIPAKVCV VSQTTEKKET WNKVLNEIVK
ESKEIVAFNT ICSATDVRQK SVQELSKEAD LVFVIGGKNS SNTTKLYEIC KKECPKSYHI
ENVKELDESL LEDESVKTIG ITAGASTPDW IINEVISKIK EL
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