Gene CPR_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1148 
Symbol 
ID4205386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1292699 
End bp1293250 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content27% 
IMG OID642565704 
Producthypothetical protein 
Protein accessionYP_698470 
Protein GI110802121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00028525 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAT ATGTATCTGA TGTAAGTAAT ATATATCATA ATATAATAAC TTCTTTCATA 
GAAAATAAAA ATATAGCAAT AGACGCTACC TTAGGAAATG GTCATGATTG TGATTTTTTA 
AGTGAACTAT TTAAAAAGGT ATATGCCTTT GATATACAAG AAGAGGCAGT AAGTTCATAT 
AAATCAAAGA ATAAAGAAAA TGTTGAAGTT ATTTTAGATT CACATGAAAA CTTTGAAACT 
TACATAAAAG AAGAAAATGT TGATTGTATA GTTTATAACT TAGGATATCT TCCAGGTAAT 
AATAAGGAAG TAACTACGGT TGCACATAGT ACTTTAAAAA GTATAGAAAT AGGATTAGAT 
TTATTAGGTG ATAATGGGTT AATGATAATA GCCCTTTATA GTGGACATGA GGAAGGTAAA 
AAAGAGAAAG ATGCCGTACT TCAGTTTACA AGTAAATTAC CTAAAAATAA ATATGGTGTT 
TTACATACAG AATTTACAAA CAGAGCTAAG AGTGCACCTT CTTTAGTTGT TATTGAAAAG 
AAGTTTAAAT AA
 
Protein sequence
MFKYVSDVSN IYHNIITSFI ENKNIAIDAT LGNGHDCDFL SELFKKVYAF DIQEEAVSSY 
KSKNKENVEV ILDSHENFET YIKEENVDCI VYNLGYLPGN NKEVTTVAHS TLKSIEIGLD 
LLGDNGLMII ALYSGHEEGK KEKDAVLQFT SKLPKNKYGV LHTEFTNRAK SAPSLVVIEK 
KFK