Gene CPR_1140 details

Gene Information

• Locus tag: CPR_1140
• Symbol: accB
• ID: 4206304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1286099
• End bp: 1286590
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642565696
• Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein
• Protein accession: YP_698462
• Protein GI: 110803625
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0962617
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTA ATGAGATTAA AGAGCTTATA GATAAAATCG ATTCTTCTAA TATTGCTTAT 
TTTGAGGTTA AAGTAGATAA TTCATATATA AAGATGGATA AATCTCTAAC TAGAAATTTA 
GTGGAAGAAA AAAAAGCTTC AAATATAGAA GAAACAGAAA AAACTGATAT ATCAGAAGAA 
AAAAATGAAT CAATTTCAAA GGTTGAGGAA GTAAAATTAC AACCTAAAGA AGAGAGAGTT 
CAGGATGAAG ACTTATATTT AGTTACTTCA CCTATGGTAG GGACATTCTA TGAATCACCT 
GGAGTTGGAG AAAAGAGTTA TGTTTCTATA GGAAGCAAAA TTTCTTCAGG AGATGTTTTA 
TGTATAGTTG AAGCCATGAA ACTTATGAAT GAAATTGAAA GTGAAGTATC TGGAGAAATT 
ATTGATATAT TAGTTCAAAA TGGAAATATG GTTGAATATG GTCAACCCTT ATTTAAGGTT 
AGGAGAGCAT AA 

 

Protein sequence

MNLNEIKELI DKIDSSNIAY FEVKVDNSYI KMDKSLTRNL VEEKKASNIE ETEKTDISEE 
KNESISKVEE VKLQPKEERV QDEDLYLVTS PMVGTFYESP GVGEKSYVSI GSKISSGDVL 
CIVEAMKLMN EIESEVSGEI IDILVQNGNM VEYGQPLFKV RRA