Gene CPR_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1139 
SymbolfabF 
ID4204712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1284846 
End bp1286087 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content33% 
IMG OID642565695 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_698461 
Protein GI110802926 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA GAGTTGTTAT AACTGGATTG GGAGCAATTA CACCAATTGG GAACAATGTA 
AATGAATTTT GGACTAATGC TAAAAAAGGT GTTTGTGGAA TTGATGAAAT AACTTTATTT
GATACTAGTG ATTATAAAGT TAAAATTGCA GCAGAAGTTA AAAACTTTAA AGCAGAGGAG
TTTATAGATA AAAAGGAAGC TAAGCGTTTA GATAGATTTA CTCATTTTGC TCTTGTAGCT
ACAGAAGAGG CAATGAAGGA TGCTAAATTA GACTTAAAGG ATGAAAATGT AGATCCAAAT
AGAGTAGGAG TTATAGTTGG TTCAGGAATA GGTGGATATG GCACCTTAGA ATCACAATTT
GATGTTTTAT TAACTAAAGG ACCAAATAGA GTTTCACCTT TTGCAATTCC ATCAGGAATA
ATAAACTTAG TTGCTGGAAA TATTGCTATT AAGTATGGGG CAAAAGGGGT ATGTGAATCA
CTAGTTACTG CATGTGCTAC AGGGGTAAGC TCTATAGGTG CAGCTTATAG AAGTATAAAA
CATGGATATT CAGATATAGT TATATCAGGT GGATCAGAGG CTTCTATAAC TAGAGCTGCC
ATTGCAGGAT TTACCAATCT TAAAGCATTA AATATTAATA ATGATCCTAA AAGAGCTTCA
ATACCTTTCG ATAAAGAAAG ATCTGGATTC GTTATGGGAG AAGGCGCTGG AATATTAATA
TTAGAAAGTT TAGAAAGCGC TAAAAAAAGA GGTGCTAGAA TTTATGGAGA AATTATAGGA
TATGGTGCAA CTTGTGATGC ATATCATATA ACTTCACCTG ATCCAGAAGG TGATGGAGCT
AAGAGAGCTA TAGAAGCAGC TATAGAAGAA GGAAAAATAA ATAAGGATGA AATTTCATAT
ATAAATGCAC ATGGAACAAG TACTCCTTTA AACGATAAAT TTGAAACTTT AGCTATTAAA
GGATGTTTTG GTGAAAAAGC TTATGACATA CCAGTTTCAT CAACAAAATC AATGACTGGT
CATTTATTAG GTGCAGCTGG AGCTATAGAA TCAGTAATAT GTGTTAAAGC TTTAGAAGAA
GGATTTATTC CACCAACAAT AGGATATAAA GTTCCTGATG AAGATTGTGA TTTAGATTAT
GTTGTAAATG AAGGTAGAGA AGCAGAATTA AATTATGTAA TCAATAATGC ATTAGGTTTT
GGTGGTCATA ACGCATCATT ATTATTTAAA AAGTGGGATT AG
 
Protein sequence
MENRVVITGL GAITPIGNNV NEFWTNAKKG VCGIDEITLF DTSDYKVKIA AEVKNFKAEE 
FIDKKEAKRL DRFTHFALVA TEEAMKDAKL DLKDENVDPN RVGVIVGSGI GGYGTLESQF
DVLLTKGPNR VSPFAIPSGI INLVAGNIAI KYGAKGVCES LVTACATGVS SIGAAYRSIK
HGYSDIVISG GSEASITRAA IAGFTNLKAL NINNDPKRAS IPFDKERSGF VMGEGAGILI
LESLESAKKR GARIYGEIIG YGATCDAYHI TSPDPEGDGA KRAIEAAIEE GKINKDEISY
INAHGTSTPL NDKFETLAIK GCFGEKAYDI PVSSTKSMTG HLLGAAGAIE SVICVKALEE
GFIPPTIGYK VPDEDCDLDY VVNEGREAEL NYVINNALGF GGHNASLLFK KWD