Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1139 |
Symbol | fabF |
ID | 4204712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1284846 |
End bp | 1286087 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642565695 |
Product | 3-oxoacyl-(acyl carrier protein) synthase II |
Protein accession | YP_698461 |
Protein GI | 110802926 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.258519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA GAGTTGTTAT AACTGGATTG GGAGCAATTA CACCAATTGG GAACAATGTA AATGAATTTT GGACTAATGC TAAAAAAGGT GTTTGTGGAA TTGATGAAAT AACTTTATTT GATACTAGTG ATTATAAAGT TAAAATTGCA GCAGAAGTTA AAAACTTTAA AGCAGAGGAG TTTATAGATA AAAAGGAAGC TAAGCGTTTA GATAGATTTA CTCATTTTGC TCTTGTAGCT ACAGAAGAGG CAATGAAGGA TGCTAAATTA GACTTAAAGG ATGAAAATGT AGATCCAAAT AGAGTAGGAG TTATAGTTGG TTCAGGAATA GGTGGATATG GCACCTTAGA ATCACAATTT GATGTTTTAT TAACTAAAGG ACCAAATAGA GTTTCACCTT TTGCAATTCC ATCAGGAATA ATAAACTTAG TTGCTGGAAA TATTGCTATT AAGTATGGGG CAAAAGGGGT ATGTGAATCA CTAGTTACTG CATGTGCTAC AGGGGTAAGC TCTATAGGTG CAGCTTATAG AAGTATAAAA CATGGATATT CAGATATAGT TATATCAGGT GGATCAGAGG CTTCTATAAC TAGAGCTGCC ATTGCAGGAT TTACCAATCT TAAAGCATTA AATATTAATA ATGATCCTAA AAGAGCTTCA ATACCTTTCG ATAAAGAAAG ATCTGGATTC GTTATGGGAG AAGGCGCTGG AATATTAATA TTAGAAAGTT TAGAAAGCGC TAAAAAAAGA GGTGCTAGAA TTTATGGAGA AATTATAGGA TATGGTGCAA CTTGTGATGC ATATCATATA ACTTCACCTG ATCCAGAAGG TGATGGAGCT AAGAGAGCTA TAGAAGCAGC TATAGAAGAA GGAAAAATAA ATAAGGATGA AATTTCATAT ATAAATGCAC ATGGAACAAG TACTCCTTTA AACGATAAAT TTGAAACTTT AGCTATTAAA GGATGTTTTG GTGAAAAAGC TTATGACATA CCAGTTTCAT CAACAAAATC AATGACTGGT CATTTATTAG GTGCAGCTGG AGCTATAGAA TCAGTAATAT GTGTTAAAGC TTTAGAAGAA GGATTTATTC CACCAACAAT AGGATATAAA GTTCCTGATG AAGATTGTGA TTTAGATTAT GTTGTAAATG AAGGTAGAGA AGCAGAATTA AATTATGTAA TCAATAATGC ATTAGGTTTT GGTGGTCATA ACGCATCATT ATTATTTAAA AAGTGGGATT AG
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Protein sequence | MENRVVITGL GAITPIGNNV NEFWTNAKKG VCGIDEITLF DTSDYKVKIA AEVKNFKAEE FIDKKEAKRL DRFTHFALVA TEEAMKDAKL DLKDENVDPN RVGVIVGSGI GGYGTLESQF DVLLTKGPNR VSPFAIPSGI INLVAGNIAI KYGAKGVCES LVTACATGVS SIGAAYRSIK HGYSDIVISG GSEASITRAA IAGFTNLKAL NINNDPKRAS IPFDKERSGF VMGEGAGILI LESLESAKKR GARIYGEIIG YGATCDAYHI TSPDPEGDGA KRAIEAAIEE GKINKDEISY INAHGTSTPL NDKFETLAIK GCFGEKAYDI PVSSTKSMTG HLLGAAGAIE SVICVKALEE GFIPPTIGYK VPDEDCDLDY VVNEGREAEL NYVINNALGF GGHNASLLFK KWD
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