Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1134 |
Symbol | |
ID | 4204011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1280935 |
End bp | 1281435 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565690 |
Product | cytidine/deoxycytidylate deaminase family protein |
Protein accession | YP_698456 |
Protein GI | 110801506 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.466602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGCA AAAGAGAAGA TTATATTTCA TGGGATGAAT ATTTTATGGG AGTTGCATTA ATTAGTGCTA AAAGAAGTAA GGATCCAAAC ACTCAAGTTG GAGCTTGTAT AGTTGATAAT GATAATAAAA TAGTAGGTAT TGGATACAAT GGTTTTCCTA AAGGATGTTC AGATGATGAT CTACCTTGGG GAAATAAGGG GGAGTTTTTA GAAACAAAAT ATCCATATGC ATGTCACGCT GAACTTAATG CTATTTTAAA TAGTACAGGT AAGAATGTTA AAAACTGCAG AGTATATGCT ACTTTGTTTC CTTGTAATGA ATGCGCAAAG GCAATAATTC AAGCTGGGAT AACTGAAGTA ATATACCTTT CAGATAAGTA TAAAGATACC GATATTGTTA AAGCCTCTAA ATTTATGTTT AATAAAGCAA ATGTAAAATA TAGGTATTTA GGAAGCAAGA GAGAAAATTT ATTAATATCA TTTAATCCAA ATGATGTTTA A
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Protein sequence | MISKREDYIS WDEYFMGVAL ISAKRSKDPN TQVGACIVDN DNKIVGIGYN GFPKGCSDDD LPWGNKGEFL ETKYPYACHA ELNAILNSTG KNVKNCRVYA TLFPCNECAK AIIQAGITEV IYLSDKYKDT DIVKASKFMF NKANVKYRYL GSKRENLLIS FNPNDV
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