| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1113 |
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| Symbol | cobD |
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| ID | 4204052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1256809 |
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| End bp | 1257756 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565669 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_698435 |
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| Protein GI | 110801459 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.386524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAA TTATAATAGG ATATGTTTTA GACCTAATAA TAGGAGATCC TAATAATCCA
TATCATCCTA TTAGATATAT AGGAAAACTA GCATCTAATA TGGAAAAGCT TTGGAGAAAG
GTTTTCAAGA AAAATCTTAA GATTGCAGGC TTCTTTGCTT GGATTTTTAT AGTTTTCATA
ACCTTTGGAG TAACTTTAGG AATTTTGCAT ATTGCGAATA AGATTAATCC TATTTTAGGA
ACTGTAGTAT CTGGAATACT TATTTATTTT TGTATTTCAG CTAAGGGGCT TAAAGTTGAA
GGACTTAAAG TAATTAAGAT TTTAAAAGAA GGAGATATTG TTAAGGCTAG AAAACAATTA
TCTTATATTG TAGGAAGAGA TACTGAAAAC CTAGATGAAG AAGCTATAGT TAGAGCTGTA
GTGGAAACTG TAGCAGAAAA TATGTCAGAT GGTATTATAG CACCTTTATT TTTTGCAGGA
ATTGGGGGAG CACCTTTAGC TTTCTTATAT AAAGCAGTAA ACACATGTGA TTCAATGTTT
GGGTATAAAA ATGAAAAATA TAAGGATTTT GGATTCTTCT CAGCTAAGCT TGATGATGTG
TTTAATTATA TTCCAGCTAG ATTAACAGCT TATCTTATAG TAATTTCTTC TTTTATTTTA
AGACTTAATT TAAAAGACAG TTTTAAAATA TACAAAAGAG ATAGATATAA TCATTCAAGT
CCTAACAGTG CTCATCCAGA AGCAGCAGTT GCAGGGGCTT TAGGAATAAG ACTTGGAGGA
GCAAATTACT ATTTTGGAAA GCTTGTAGAA AAACCAACCA TAGGAGATGC TAAAAAGAAA
ATAGAAATTT CAGATGTTTA TAAGACTAAT AATATATTAG GAATGGTTTC TTTTTTAGGA
ATGGTAGTAG CACTTATTAT TAGATGTATT TTAGAGGTGA TTATATGA
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| Protein sequence | MIKIIIGYVL DLIIGDPNNP YHPIRYIGKL ASNMEKLWRK VFKKNLKIAG FFAWIFIVFI
TFGVTLGILH IANKINPILG TVVSGILIYF CISAKGLKVE GLKVIKILKE GDIVKARKQL
SYIVGRDTEN LDEEAIVRAV VETVAENMSD GIIAPLFFAG IGGAPLAFLY KAVNTCDSMF
GYKNEKYKDF GFFSAKLDDV FNYIPARLTA YLIVISSFIL RLNLKDSFKI YKRDRYNHSS
PNSAHPEAAV AGALGIRLGG ANYYFGKLVE KPTIGDAKKK IEISDVYKTN NILGMVSFLG
MVVALIIRCI LEVII
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